Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1334 |
Symbol | |
ID | 5297748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1342361 |
End bp | 1343086 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640769609 |
Product | WecB/TagA/CpsF family glycosyl transferase |
Protein accession | YP_001306568 |
Protein GI | 150021214 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1922] Teichoic acid biosynthesis proteins |
TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000201656 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAGACG TGGAAGTAGT AAATTTCTCG CAGTTGAGAT TAACTATTGG AAGTGAAGAA GAAGTAAGAA AAAAGATAGT TGAAGATGTT AATAACGGTG TAAAAACATT TGTAGTTACT TTAAATGCGT CTATTCTTTT ACGTACATTA AAGGATAGTT ATTATAGAAA AATTGTTGAG GAAGCTAATT ATATTATTCC AGATGGTTCT GGTATAGTTT GGGCGTTAAA AAGGAATAGG AAAATATTGA CGGACAGAAT TACCGGTATA GATACAATGC TTTATCTGTG TGAAAAGGCG AAAATATATG GTTGGAAAGT ATATTTACTT GGAGCCAAAA GGAAGGTTGT AGAAAAGGCT GCCAGAAAAT TAAAAAAAAG AGGTATAAAT GTTGTAGGGT ATTATCATGG GTATTTTTCA AAAAGTGATA CTACTCCCAT TGAAGAAATA GAGTCTTTAA AACCAGATCT TTTATTTGTT GGCATGGGAG TTCCTAAGCA AGAAGAATGG ATATACGAAA ATTTTTCTTT GCCCTTTAAG TTGGCTATGG GTGTAGGTGG GAGTTTTGAT GTTATTTCAG GTAGTAAAAA GAGGGCTCCT GTATTTTTTC AACGGATGAA ACTTGAGTGG TTTTACAGAT GGTTGCAATC CCCGATAAAA AAAAGGCATA TTCCCATTGA AATTGTAAAA TATACATTTA TGGTTTTAAG AGGAAAGATA AGATGA
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Protein sequence | MEDVEVVNFS QLRLTIGSEE EVRKKIVEDV NNGVKTFVVT LNASILLRTL KDSYYRKIVE EANYIIPDGS GIVWALKRNR KILTDRITGI DTMLYLCEKA KIYGWKVYLL GAKRKVVEKA ARKLKKRGIN VVGYYHGYFS KSDTTPIEEI ESLKPDLLFV GMGVPKQEEW IYENFSLPFK LAMGVGGSFD VISGSKKRAP VFFQRMKLEW FYRWLQSPIK KRHIPIEIVK YTFMVLRGKI R
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