| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1333 |
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| Symbol | |
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| ID | 5297891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1341049 |
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| End bp | 1342209 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640769607 |
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| Product | Orn/DAP/Arg decarboxylase 2 |
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| Protein accession | YP_001306567 |
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| Protein GI | 150021213 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000335599 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAATAAGA TACTTGTAAA TGAGAGATTA AAAAGGGTTG CTGAAACTTT TGGAACTCCT
GTTTTAGTTA TGGATTTGAA TATAGTTAAG GCAAACTATG AGAAACTTAT TGACAATGTA
AGAAATTCAA GAGTATATTA TGCTGTTAAA GCCAACTCCC ATATAGAGAT TTTAAAGCTT
TTAAGAGATT TAGGTAGTTA TTTTGATGTT GCTTCAAGAC CCGAGATAGA GAAGTTGCTT
AGTATAGGTG TTGAACCTGA AAGGATGAGT TTTGGAAACA CTATAAAAAA AACTAAAGAT
ATTAGTTTTG CGTATAATAA TGGAATAAGA ATGTTTGCGG TGGATAGTGA AATGGAAATT
GAGAAAATAG CGGACAATGC CCCTGGCTCA GATATATACG TTAGAATAAG TACCAATGGA
ATGGAAGATG ATGCTGATTG GCCACTTACA AGGAAATTTG GAACAAGCGT TGATCATGCA
ATAAAATTGG TTAAGTATGC TGTTGATTTA GAGTTAAATC CCATTGGTGT AAGTTTTCAT
GTTGGTTCCC AAAATTATAA CCCTGACAAT TGGCGGGTTG CAATACGCGA AGTTTCTGTG
GTGTTTGAAG AAGCAAGGAA AATGGGGATA GATATGTACA TGGTAAATAC GGGCGGAGGA
ATGCCTGTAA AATATTCAAG AAACATTCCA TCTGTTGAGG AAATTTCAGA GGTAATAAAT
AAAGCAATAG TAGATTATAT AGGTGAAAAT ACTTTGGTTG TTTTGGAGCC GGGACGGTCA
ATGGTAGGGA GTGCCGGGGC GATGGTTACA AGCGTAATAT TGAGAAGTAA GAAAGGTGAA
GAAAATTGGG TATATACCGA TGCAGGGATA TTTCATGGTT TAACGGAAAC TATTCAAAAC
ATCAGATATG AAGTGGAAGT AATAGGTAGA GAACTTGAAG AAAAGGGAAA GTTCGTACTT
GCAGGGCCAA CTTGTGACAG TGTTGATGTA ATGTATTATG ATATAGAACT TGCTAAGAAT
GTAACTATTG ATGATTTGAT TGTATTGTAT AACACAGGTG CGTATACTAC TGAGTATAGT
ACAAATTTTA ATGGAATAGA ACCACCTAAA GTGGTTTTTG AAGAGATATT TGTAAAGGAA
CCATTGACAG AAGAAGTGTG A
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| Protein sequence | MNKILVNERL KRVAETFGTP VLVMDLNIVK ANYEKLIDNV RNSRVYYAVK ANSHIEILKL
LRDLGSYFDV ASRPEIEKLL SIGVEPERMS FGNTIKKTKD ISFAYNNGIR MFAVDSEMEI
EKIADNAPGS DIYVRISTNG MEDDADWPLT RKFGTSVDHA IKLVKYAVDL ELNPIGVSFH
VGSQNYNPDN WRVAIREVSV VFEEARKMGI DMYMVNTGGG MPVKYSRNIP SVEEISEVIN
KAIVDYIGEN TLVVLEPGRS MVGSAGAMVT SVILRSKKGE ENWVYTDAGI FHGLTETIQN
IRYEVEVIGR ELEEKGKFVL AGPTCDSVDV MYYDIELAKN VTIDDLIVLY NTGAYTTEYS
TNFNGIEPPK VVFEEIFVKE PLTEEV
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