| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1325 |
|---|
| Symbol | |
|---|
| ID | 5297067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1334295 |
|---|
| End bp | 1334837 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640769599 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001306559 |
|---|
| Protein GI | 150021205 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2316] Predicted hydrolase (HD superfamily) |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGAA ATGAAGCATT AAAACTTTTA AAAGAACACG TAAAAACTAA AAATTTAATA
AAACACTGTA TTGCTACTGA AGCATTAATG AGAAAATTTG CAAAATATTT TGGAGAGGAT
GAAGACAAGT GGGGAATTGC AGGACTTCTT CATGACCTTG ATTATGAATA CACAAAAGAT
AATCCTGAGT TGCACGGGTT GAAATCTGTA GAGATATTGG GAGATAAAGT TAGTGAAGAT
GTTAAAAATG CAATATTAGC CCATTGCGGA AAAAAGAAAA GGGAAACTTT GATGGAAAAA
GTAATTTATG CAGCAGATCC CACAACAGGT TTTATTGTTG CCGCTGCGTT GATTAGACCT
GAAAAAAAGT TAGAGCCTGT AGATGTAAGA TTTTTGATGA AGAGATTTAA AGAAAAATCT
TTTGCAAAAG GAGCTAATAG AGAGCAAATG AAAAGTTGTG AGGATTTTGG ATTAACATTG
GAAAAGTTTT ATGAGATGTC ATTGGATGCA ATGAAAGAAA TTTCAGAGGA GCTTGGTTTA
TGA
|
|---|
| Protein sequence | MDRNEALKLL KEHVKTKNLI KHCIATEALM RKFAKYFGED EDKWGIAGLL HDLDYEYTKD
NPELHGLKSV EILGDKVSED VKNAILAHCG KKKRETLMEK VIYAADPTTG FIVAAALIRP
EKKLEPVDVR FLMKRFKEKS FAKGANREQM KSCEDFGLTL EKFYEMSLDA MKEISEELGL
|
|---|
| |