Gene Tmel_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1315 
Symbol 
ID5297450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp1322625 
End bp1323077 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content31% 
IMG OID640769589 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_001306549 
Protein GI150021195 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.380368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGCAG TCGTTCAAAG GGTAAATAGT GCAAATGTAG ATGTAAATGG AAAAATTATT 
GGAAAAATAA AAAAGGGATT GCTCGTGTTG CTTGGTGTTG GAAAAAACGA CACTGAAAGT 
GATGCTGAAT ACTTAGTTAA TAAAATCTTA AATCTTAGAA TCTTTGATGA TAATAAAGGA 
AAAATGAATC TATCACTTTT AGATATTAAA GGCGATATTT TAATAGTTTC ACAATTTACG 
CTTTACGGAG ACTGTAGAAG AGGCAGAAGG CCTTCATACT CTGATTCTGC TTCCCCTGAA 
AAAGCAAAAA AACTTTACGA ATATTTTGTT GAAAAAATAA GAAAAGAATA TAACATTAAA 
GTTGAAACAG GAGAGTTTGG TGCATATATG AAAGTAAATC TTGAAAATGA TGGACCAGTA 
ACTTTACTTT TGGATTCAAA GAAGGTGTTC TAA
 
Protein sequence
MRAVVQRVNS ANVDVNGKII GKIKKGLLVL LGVGKNDTES DAEYLVNKIL NLRIFDDNKG 
KMNLSLLDIK GDILIVSQFT LYGDCRRGRR PSYSDSASPE KAKKLYEYFV EKIRKEYNIK 
VETGEFGAYM KVNLENDGPV TLLLDSKKVF