| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1309 |
|---|
| Symbol | |
|---|
| ID | 5297368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1318833 |
|---|
| End bp | 1319795 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640769583 |
|---|
| Product | polysaccharide pyruvyl transferase |
|---|
| Protein accession | YP_001306543 |
|---|
| Protein GI | 150021189 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2327] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03609] polysaccharide pyruvyl transferase CsaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGAATA AAATTTTACT TGTGGGATAT TATGGATTTG GAAATTTTGG TGATGAGTTA
ATGAGAAGAA GTATTAAAAA TTTTTTGAAA GAAAGAAACT ATGAAGTTTA TGAATTGTTG
CCTAAAGAAA ATCTTGATGC GAGAAGTTAT AACAGATTTA ATTTTTTTTC CGTTATTTCT
GCTATTTTAA AATCTGATAT TGTGGTTTGT GGGGGTGGCG GGATTCTTCA AGATAAAACC
AGTCTAAAGA GTTTTTTATA TTATTATTCC ATTTTTAAAC TATCGTTGAT TTTAAAAAAA
CCTGTTTTAT TTTTTGGAAA TAGTTTTGGT CCATTAAATT ATTATGTTTC TAGGGTTTTA
ATAAAAGGTT TGTTAAGAAG TGGGAAATTG TATGTTTTTG CGAGAGATCC TGTTTCGTAT
AAGTTTTCAA GCTGCTTCAA TGCGAACACC CATCTTGGTA CTGATCCAGG GATTTTGGGT
TTAGAAGATA AGGTTGTAAC ATTTGAAAAG AAAGTGGTGA TTATTCCAAG AAAGTTGAAA
AGTTATGTAC CAATATTGTT TGATTTAAAA AGAAATGGTG TAGAGGAAGT GGTATATTTA
CCATTTGCAC CTGAAGATAT AAATCTTTCA AAAAAACTTT CAAGTTTTTC CATAAAAGGA
CTTAAGGTGA GGTTTTCAGA TGATATAAAC GAGATATTGA GTGCTAGTGC GGTAATTTCA
GAGAGATTTC ATGGTTCTCT TGTTTCTGCA TTTTATGGGA AGCCTTTTAT ATCAGTAAAT
GACGAGAAAT TTAGGAGATT TTTTTCAAGA TATGATGATA GAGATTATTA CGCAAAAGAT
CTGTTTCAAG CGAGTTTGAA GTTAAAAAAG TTAAATGTTC CACAGGTTAG AGCCGATATG
ATAAAGGATT GTAAAGATAT GTACGAAAAA TTTGAGAAAT TACTGTTAAA TGTTATACGG
TAA
|
|---|
| Protein sequence | MKNKILLVGY YGFGNFGDEL MRRSIKNFLK ERNYEVYELL PKENLDARSY NRFNFFSVIS
AILKSDIVVC GGGGILQDKT SLKSFLYYYS IFKLSLILKK PVLFFGNSFG PLNYYVSRVL
IKGLLRSGKL YVFARDPVSY KFSSCFNANT HLGTDPGILG LEDKVVTFEK KVVIIPRKLK
SYVPILFDLK RNGVEEVVYL PFAPEDINLS KKLSSFSIKG LKVRFSDDIN EILSASAVIS
ERFHGSLVSA FYGKPFISVN DEKFRRFFSR YDDRDYYAKD LFQASLKLKK LNVPQVRADM
IKDCKDMYEK FEKLLLNVIR
|
|---|
| |