Gene Tmel_1303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1303 
Symbol 
ID5296671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp1313830 
End bp1314489 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content25% 
IMG OID640769577 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_001306537 
Protein GI150021183 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTAA TCTTCAAATT TGAAGAGTTT GAAGGTCCAT TAGATTTGAT TATTTTTCTT 
GTACAAAAGA AAAAGCTTAG CGTTAGGGAA ATTCCTATTT CCCAGCTTGC CGATGAATTT 
TATGAATATA TAAAAAAAAT GAAAGAATTT AACTTAAAAC TAACATCTGA ATTCATTGCA 
ACAGCTGCAT ATCTAATGGA ATTAAAATCA AAAAGTTTAT TGCCTAGAAG CAATGAAGAC 
AGTGAGTTTC AAAAAAAGAA AGAAAAATTT TATTCTCAGG TAGAGCAATA CGCAAAAATA 
AAAGAATTTA CGGAAAAGGT AAAATCAGTT GAAAAATTAA GTCCAAAAAA AGTTCCCATA 
TCAGTCAAAG CTATATTTCC AAAAATCAAC GAAAAAAAAT TAAAAAAACT AATAACAAGT 
ATATTAAAAG AAGTGGAGTT AAAACAAAAA ATTTACAAAA TAAAAAGAGA AGAAATATCA 
CTTGAAACTA TTATGAGCCA AATTTTAACC ACAGCAGAAG AAGATATAAT AACTATATTA 
AAAAACTCAA AAAGTAAATA TGAAGTGATA TTAAAATTTT TAGCAATTTT GGAATTAATA 
AAAATGAATA AGATAGTTTT GGAAGAAAAC CTTAAAATAA GGAGAATAAA AAATGGATAG
 
Protein sequence
MELIFKFEEF EGPLDLIIFL VQKKKLSVRE IPISQLADEF YEYIKKMKEF NLKLTSEFIA 
TAAYLMELKS KSLLPRSNED SEFQKKKEKF YSQVEQYAKI KEFTEKVKSV EKLSPKKVPI 
SVKAIFPKIN EKKLKKLITS ILKEVELKQK IYKIKREEIS LETIMSQILT TAEEDIITIL 
KNSKSKYEVI LKFLAILELI KMNKIVLEEN LKIRRIKNG