| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1300 |
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| Symbol | |
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| ID | 5297070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1310688 |
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| End bp | 1312184 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640769574 |
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| Product | sodium:neurotransmitter symporter |
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| Protein accession | YP_001306534 |
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| Protein GI | 150021180 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.538845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAGAC AAAAGTGGGG TTCAAGATGG GCTTTTGTTC TTGCGGCTAT AGGATCTGCT
GCAGGTTTGG GTAACGCTTG GAGATTTCCT TATATGGCAT ATTCAAACGG TGGTGGAGCT
TTTTATGTTC CGTACTTTAT AGCATTATTT TTAGCGGGAA TACCACTTTT AATGGCAGAA
TTTGCAATTG GACAAGGCTT CCAAAGTGGT GCGCCAAGAT CACTTGCCAA AATTAAAAAA
GGTGCAGAAT TTATTGGTTG GTGGGCTGTT ATAACAGGTG CTTTGATAAC GTTTTACTAT
AATGTTATCA TGGCATACAT CTTTAACTAT CTATACTATT CATTTGGAGT AGCATGGAAA
GGCGATCCAA ACAAATTTTT CTTTAATGAA TTCTTACAAG TATCCAATGG TCCTAGTGAA
TTAGGCTCAA TTAGATGGCC AATAGTTATT GGACTTGCCT TGACATGGTT ATGGATTTAT
TTCATTTTAA GAAAAGGAAC AACTTCTGTG GGAAAAACAG TTGCTTGGAC AGTTCCACTT
CCTGTAATTT TATTGATTAT ACTTGGAATC AGAGGAATTA CATTGGAAGG GGCAGCACAG
GGACTTAATT TTTTATTCCA ACCAAACTTT GCAAAACTTG CAGAACCAAG GGTTTGGGCT
AATGCTTTTG GTCAAATTTT CTTTACGCTA AGCCTTGCGT TCGGTATTAT GATTGCCTAT
GGAAGCTATA ATAAAAAAGA AGAAGATATT GCTAACAACG CTATTATAAC TGCCCTTGGA
AACAGCGCTA CATCTTTCCT TGCTGGAATT GCTGTTTTTT CAGTGCTCGG ATATATGGCT
CTCCAAATTA ATTCTCCAAT AGATGAAGTT GTAAGTGGTG GTATAGGTCT TGCATTTGTT
GTGTATCCAC AAGCTATTTC TCTATTCCCA GGTGGAGTAA TAGTTCAATC AATAATAGGG
CTCGCATTCT TTGTAATGCT TCTTACACTT GGAATTGATT CTGCATTCTC GTTGGTAGAA
GCGGTAGAAG CAGCTGCTTC TGATAAGTTT AAATTCAACA AACGCTCTTT CTTAATTGGT
TTTTCCATAT TTGGATTCTT AGTTGGTCTT CTTTACTCAA CACAAGGTGG TTTGTACTGG
CTTGACATTA TTGATCATTT CTTAAGTATT TATGCTTTGT TAATTGTTGG AATTCTTGAA
TCAATAATAA TCGGGTGGGT TTTAGATGCG GAAAAATTGA GAAATTATAT AAACAAAGTA
TCTGAAGTTA AAATAGGAAA ATGGTTTGAC ATTTCATTAA GATACATCAT CCCAGGTTCG
TTAATAATAA TTTTGGGATT AACACTTTAT GATGAAATTA AAAATCCATA CGGTGGATAT
CCAACTTGGG CATTACTTAC TGGATTTGCA GTATTAATCG CTACACCAAT TATTGCAATT
ATATTATCTA AAGTTCCTCC AAAAGACAAC GATTACTACA AAAAAGAGGA AATGTAA
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| Protein sequence | MARQKWGSRW AFVLAAIGSA AGLGNAWRFP YMAYSNGGGA FYVPYFIALF LAGIPLLMAE
FAIGQGFQSG APRSLAKIKK GAEFIGWWAV ITGALITFYY NVIMAYIFNY LYYSFGVAWK
GDPNKFFFNE FLQVSNGPSE LGSIRWPIVI GLALTWLWIY FILRKGTTSV GKTVAWTVPL
PVILLIILGI RGITLEGAAQ GLNFLFQPNF AKLAEPRVWA NAFGQIFFTL SLAFGIMIAY
GSYNKKEEDI ANNAIITALG NSATSFLAGI AVFSVLGYMA LQINSPIDEV VSGGIGLAFV
VYPQAISLFP GGVIVQSIIG LAFFVMLLTL GIDSAFSLVE AVEAAASDKF KFNKRSFLIG
FSIFGFLVGL LYSTQGGLYW LDIIDHFLSI YALLIVGILE SIIIGWVLDA EKLRNYINKV
SEVKIGKWFD ISLRYIIPGS LIIILGLTLY DEIKNPYGGY PTWALLTGFA VLIATPIIAI
ILSKVPPKDN DYYKKEEM
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