Gene Tmel_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1298 
Symbol 
ID5296598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1308454 
End bp1309443 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content32% 
IMG OID640769572 
Productflagellar motor switch protein FliM 
Protein accessionYP_001306532 
Protein GI150021178 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATG TATTAAGTCA AGAAGAAATA GATCGATTAT TGCAGGCTGT TAATCAGGGT 
GAAGTTTCAA TTGAACAAGT AAAAAAAGAA GAAGAAGAAA AAAAAGTTAG AACATATGAT
TTTTTAAGGC CGAGAAAATT TTCCAAAGAG CAGGAAAGAA CTTTACAAAT GCTCCATGAA
AACTTTGCAA GGACTTTGTC GACCTATTTT TCTGGAAGGC TTAGAAGTTT TGTTGCAGTA
AATTTGGTAG GAATAGACCA AATGACTTAT GATGAATTTA TAAAATCCAT AAAAAATCCA
TCTTTTATTA CCATATTTTC AGCTAAGGAA TTTGTTGGAA GTGCGGTTTT AGATATAGAT
TTAGCTATCT TTTACGGGAT TTTAGAAATT TTATTGGGTG GACCTGGATC TATGACTGAG
ATTAATAGAC CTCCAACAGA AACGGAAATA GAAGTAATGA GAAAGGAAGT TGTAAACATA
TTAACAAATT TATCTCAAGC TTGGACTACC GTTTATTCTT TTGTTCCAGT TATAGAGGCT
ATTGAAACGA ATCCACAGTT TGTACAAGTT GTTGCTTTAA ATGAAATGGT TTTAGTTATT
ACATTTTTTG TGAATATAGG AAATGTAGAA GGGTATGTAA ATATTTGTTG GCCATCGTCT
TTGATTGAGC CAATAGGTGA AAAACTAACC ACTCAAAGTT GGTTTAAAAC AAAACAAAAA
GTTGTTTCAG AAGAAGATAT GAAGGCTTTA AAGGAAAATC TTGCAAGAAC AATTGTAGAA
TTATCTGCAA CAATTGGAGA GACGAATTTG ACTTTGTGGG ATATTTTAAA CCTAGAGGTT
GGGGATGTTA TTAGATTAAA TACCTTTAAA GAAGATCCTT TGAAAATAAA ACTGAATGGA
AAGGATAAGT TTTTGGGTGC ACCAGGAGTA TTCAAAGGAA AGTATGCTGT TAAGATTTTG
GAAGTGTTTG ATGAGGAGGA GATAAAATGA
 
Protein sequence
MSDVLSQEEI DRLLQAVNQG EVSIEQVKKE EEEKKVRTYD FLRPRKFSKE QERTLQMLHE 
NFARTLSTYF SGRLRSFVAV NLVGIDQMTY DEFIKSIKNP SFITIFSAKE FVGSAVLDID
LAIFYGILEI LLGGPGSMTE INRPPTETEI EVMRKEVVNI LTNLSQAWTT VYSFVPVIEA
IETNPQFVQV VALNEMVLVI TFFVNIGNVE GYVNICWPSS LIEPIGEKLT TQSWFKTKQK
VVSEEDMKAL KENLARTIVE LSATIGETNL TLWDILNLEV GDVIRLNTFK EDPLKIKLNG
KDKFLGAPGV FKGKYAVKIL EVFDEEEIK