| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1272 |
|---|
| Symbol | |
|---|
| ID | 5296834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 1280137 |
|---|
| End bp | 1281072 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640769545 |
|---|
| Product | fructose-1,6-bisphosphate aldolase, class II |
|---|
| Protein accession | YP_001306506 |
|---|
| Protein GI | 150021152 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0191] Fructose/tagatose bisphosphate aldolase |
|---|
| TIGRFAM ID | [TIGR00167] ketose-bisphosphate aldolases
[TIGR01859] fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.21247 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGTAA ACACCAAAGA AATTTTGGAA GATGCAAGTA AAAAATACTA CGCAGTTCCC
GCATTCAACA TCAACAACTT AGAATTTTTA ATGGCAATTC TTCAAGGCGC CGTCGAGAAA
AAGGCTCCTA TTATAATCGA AACCAGTGAA GGAGCTATTA AGTATGCTGG AAATGGTAAT
CCCTTAAGAG GGGCAAGATT TTTTGCAGAA ACCGTTAAAA ATTATGCAGA AAGCCTAGAT
ATTCCAGTTG CATTACATCT TGACCACGGT AAAAACCTCG AATATATAGC AGCTGCAATT
AAAGCTGGAT ATTCATCCGT CATGATAGAT GCTTCACACG AAGAATTTGA AAAAAACCTA
GAAATAACAA AAGAAGTTGT TAAATGGGCA CATGCTGCAG GTGTTTCTGT TGAAGCAGAG
CTTGGCCAAT TAGCAGGCAT TGAAGATAAT GTAGTAGCAA AAGAAAATGT TCTAGTAGAC
CCTCAACAAG CAAAAATTTT TGTTGAAGAA ACTAATGTGG ACTTTCTCGC TCCAGCTATT
GGAACAAGTC ACGGTGCATT TAAATTTAAA GGAGAAGCAA AGCTCGACTT TGAAAGACTT
AAAAGAGTAA AAGAATTAAC AAAAATTCCT TTGGTATTAC ACGGGGCTTC AAGTGTACCA
ACAAAATTTG TTGAACTTGC AGAAAAATAC GGAGCAAATT TAGGCGGAGC AAAAGGTGTA
CCACAAGAAG ACATCAAAAA ATGCGTGGAA TTAGGTATAA ATAAAGTAAA TACTGATACA
GACCTAAGAA TTGCATTCCT TGCCGGACTT AGAAAACACC TTTCTGAAAA CGAAAAAGAA
TTCGATCCGC GAAAATATTT CAAAGAAGGT ATGGAGTTCG TAAAAGAAGT AGTCATGGAA
AGGTTAGAAT TCCTGAACAC CGCTGGTAAA GCTTAA
|
|---|
| Protein sequence | MYVNTKEILE DASKKYYAVP AFNINNLEFL MAILQGAVEK KAPIIIETSE GAIKYAGNGN
PLRGARFFAE TVKNYAESLD IPVALHLDHG KNLEYIAAAI KAGYSSVMID ASHEEFEKNL
EITKEVVKWA HAAGVSVEAE LGQLAGIEDN VVAKENVLVD PQQAKIFVEE TNVDFLAPAI
GTSHGAFKFK GEAKLDFERL KRVKELTKIP LVLHGASSVP TKFVELAEKY GANLGGAKGV
PQEDIKKCVE LGINKVNTDT DLRIAFLAGL RKHLSENEKE FDPRKYFKEG MEFVKEVVME
RLEFLNTAGK A
|
|---|
| |