Gene Tmel_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1266 
Symbol 
ID5297403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp1273719 
End bp1274717 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content36% 
IMG OID640769539 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001306500 
Protein GI150021146 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.518959 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAG CCATTAACGG TTTTGGAAGA ATTGGAAGAT TAGTACTTAG GGAACTCATA 
CGCCGCAATA GTGACATTGA CATTGTTGCA ATTAACGATT TGACTGATGC AAAAACATTA 
GCCCATCTTT TCAAATATGA TTCCGTTCAC AAAATTTTAC CTAACGAAAT CAAAGCAACT 
GAAAATTCCA TTATAATCGA CGGAAAAGAA ATTAAAATAT TCGCAGAAAA AGACCCAGAA 
AATCTCCCAT GGAAAGACCT AAATATTGAC GTAGTTGTTG AGTCAACCGG TGTTTTCAGA 
AACAGAGAAG GAGCAGAAAA ACATCTTAAG GCCGGTGCCA AAAAAGTTGT AATTACTGCT 
CCTGCAAAAG GTGAAGATAT AACAATAGTT CTAGGTTGCA ACGAAGAACA ACTAAAACCA 
GAGCACAAAA TAATATCTTG TGCATCATGT ACAACAAACT CAATAGCATC CATTGCAAAA 
GTGATTAACG ATGAATTTAA AATAATAACA GGTCATTTAA TAACCGTTCA CTCATATACA 
AATGACCAAA GAATCCTTGA CCTTCCACAT AAGGATTTGA GAAGAGCAAG GGCTGCAGCT 
GTAAATATAA TACCAACAAC AACGGGTGCT GCGAAAGCTG TCGCATTGGT TGTCCCAGAA 
TTGAAAGGAA AATTAGATGG TATGGCAATA AGGGTGCCAA CTCCAGACGG TTCTTTAACA 
AATCTAAGTG TAATTGTTGA AAAAGCAACT ACAGCTGAAG AAGTAAACGA AGTAGTAAAG 
AAAGCAACTG AAGGAAGACT AAAAGGAATA ATAGGTTACA ACACAGAACC AATTGTAAGT 
GGTGACATTG TGGGAACAAC ATATGCCGGA ATCTTTGATG CCACACTTAC GAAAGTTATG 
AATGGTAACT TAGTAAACAT CTTCTCCTGG TATGATAATG AATATGGTTA CACATGCAGA 
GTTGTAGATA CTCTTGAACT TGTCGAAAAG ATGTTATAA
 
Protein sequence
MRIAINGFGR IGRLVLRELI RRNSDIDIVA INDLTDAKTL AHLFKYDSVH KILPNEIKAT 
ENSIIIDGKE IKIFAEKDPE NLPWKDLNID VVVESTGVFR NREGAEKHLK AGAKKVVITA 
PAKGEDITIV LGCNEEQLKP EHKIISCASC TTNSIASIAK VINDEFKIIT GHLITVHSYT 
NDQRILDLPH KDLRRARAAA VNIIPTTTGA AKAVALVVPE LKGKLDGMAI RVPTPDGSLT 
NLSVIVEKAT TAEEVNEVVK KATEGRLKGI IGYNTEPIVS GDIVGTTYAG IFDATLTKVM 
NGNLVNIFSW YDNEYGYTCR VVDTLELVEK ML