Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1265 |
Symbol | pgk |
ID | 5297643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1272443 |
End bp | 1273651 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640769538 |
Product | phosphoglycerate kinase |
Protein accession | YP_001306499 |
Protein GI | 150021145 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.65973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAT TAACGATTAG AGACATAGAT ATAAAAAATA AAAAGGTTAT CATGAGAGTT GATTTTAACG TGCCATTAAA AGATGGAAAA ATTACAGATG ATACAAGAAT TGTTGAAGCT CTCCCTACTA TAAAATACGC AATTGAAAAT AATGCTGTTG TAATACTTCT CTCTCACTTA GGAAGGCCAA AAGGTGAAAG AAAACCTGAA TTTTCATTAA AACCAGTTTC CGAAAGATTA AGTGAACTTT TAGGTAAACA AGTTACATTT GTCCCAGAAC TATATGGTGA AGAAGTTAAA ATGGCCATTG ACAATGCAAA ACCTGGAGAT GTAATTCTTT TAGAAAATAC GAGGTTTGAT AAGGGAGAAA CAAAAAACGA TCCTGAACTT GCAAAAAAAT GGGCCGATCT TGCAGACATT CACGTAAACG ATGCATTCGG TACAGCTCAT AGAGCTCATG CAAGTAATGT AGGAATATCC CAATACATCC CCAGTGTAGC TGGGTTTTTA ATGGAAAAAG AAATAAAATT TCTTTCAAAA GCCACTTTAA ATCCTGAAAA ACCATATGTT GTTATATTAG GTGGGGCAAA GGTTTCCGAC AAGATAGGAG TAATTACAAA TTTACTAAAT AAAGCAGATA AAATACTTAT TGGTGGTGCT ATGATGTTTA CATTTCTAAA AGCACTTGGT AAAAATGTTG GTTCATCATT AGTAGAAGAA GACAAGTTAG ACCTTGCAAA GAGAATATTA GAAGAAGCAA AGGAAAAAGG CGTGGAGTTT GTTCTTCCAG TAGATGCAGT ATGTGCTCAA AAAATTGAAA GTGGTGTTGA AACAAAAACA TTTAGAATTA ATGATGGCAT ACCAGAAGGT TGGATGGGAC TTGATATAGG GCCAGAATCA ATCAAACTTT TCAAAGAAAA AATATCCGGG GCAAAAACCA TAGTTTGGAA TGGACCTATG GGTGTATTTG AAATAGAAGA CTTTGAAACT GGAACAAAAG AAGTAGCTAT TTCAATAGCC GCTGAAACTG AAAAGGGTGC AACTACAGTT ATCGGTGGTG GAGATAGTGC AGCAGCAATT GCAAAATTCA ATCTAAAAAA TAAAGTTTCA CACGTATCAA CAGGTGGAGG TGCTTCACTA GAATTTCTTG AAGGAAAAGA ATTGCCAGGT ATTGCATCAA TAGCAAGTAA AAAAAAAATA GAAAATTAA
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Protein sequence | MEKLTIRDID IKNKKVIMRV DFNVPLKDGK ITDDTRIVEA LPTIKYAIEN NAVVILLSHL GRPKGERKPE FSLKPVSERL SELLGKQVTF VPELYGEEVK MAIDNAKPGD VILLENTRFD KGETKNDPEL AKKWADLADI HVNDAFGTAH RAHASNVGIS QYIPSVAGFL MEKEIKFLSK ATLNPEKPYV VILGGAKVSD KIGVITNLLN KADKILIGGA MMFTFLKALG KNVGSSLVEE DKLDLAKRIL EEAKEKGVEF VLPVDAVCAQ KIESGVETKT FRINDGIPEG WMGLDIGPES IKLFKEKISG AKTIVWNGPM GVFEIEDFET GTKEVAISIA AETEKGATTV IGGGDSAAAI AKFNLKNKVS HVSTGGGASL EFLEGKELPG IASIASKKKI EN
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