Gene Tmel_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1265 
Symbolpgk 
ID5297643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1272443 
End bp1273651 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content34% 
IMG OID640769538 
Productphosphoglycerate kinase 
Protein accessionYP_001306499 
Protein GI150021145 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0126] 3-phosphoglycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.65973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAT TAACGATTAG AGACATAGAT ATAAAAAATA AAAAGGTTAT CATGAGAGTT 
GATTTTAACG TGCCATTAAA AGATGGAAAA ATTACAGATG ATACAAGAAT TGTTGAAGCT
CTCCCTACTA TAAAATACGC AATTGAAAAT AATGCTGTTG TAATACTTCT CTCTCACTTA
GGAAGGCCAA AAGGTGAAAG AAAACCTGAA TTTTCATTAA AACCAGTTTC CGAAAGATTA
AGTGAACTTT TAGGTAAACA AGTTACATTT GTCCCAGAAC TATATGGTGA AGAAGTTAAA
ATGGCCATTG ACAATGCAAA ACCTGGAGAT GTAATTCTTT TAGAAAATAC GAGGTTTGAT
AAGGGAGAAA CAAAAAACGA TCCTGAACTT GCAAAAAAAT GGGCCGATCT TGCAGACATT
CACGTAAACG ATGCATTCGG TACAGCTCAT AGAGCTCATG CAAGTAATGT AGGAATATCC
CAATACATCC CCAGTGTAGC TGGGTTTTTA ATGGAAAAAG AAATAAAATT TCTTTCAAAA
GCCACTTTAA ATCCTGAAAA ACCATATGTT GTTATATTAG GTGGGGCAAA GGTTTCCGAC
AAGATAGGAG TAATTACAAA TTTACTAAAT AAAGCAGATA AAATACTTAT TGGTGGTGCT
ATGATGTTTA CATTTCTAAA AGCACTTGGT AAAAATGTTG GTTCATCATT AGTAGAAGAA
GACAAGTTAG ACCTTGCAAA GAGAATATTA GAAGAAGCAA AGGAAAAAGG CGTGGAGTTT
GTTCTTCCAG TAGATGCAGT ATGTGCTCAA AAAATTGAAA GTGGTGTTGA AACAAAAACA
TTTAGAATTA ATGATGGCAT ACCAGAAGGT TGGATGGGAC TTGATATAGG GCCAGAATCA
ATCAAACTTT TCAAAGAAAA AATATCCGGG GCAAAAACCA TAGTTTGGAA TGGACCTATG
GGTGTATTTG AAATAGAAGA CTTTGAAACT GGAACAAAAG AAGTAGCTAT TTCAATAGCC
GCTGAAACTG AAAAGGGTGC AACTACAGTT ATCGGTGGTG GAGATAGTGC AGCAGCAATT
GCAAAATTCA ATCTAAAAAA TAAAGTTTCA CACGTATCAA CAGGTGGAGG TGCTTCACTA
GAATTTCTTG AAGGAAAAGA ATTGCCAGGT ATTGCATCAA TAGCAAGTAA AAAAAAAATA
GAAAATTAA
 
Protein sequence
MEKLTIRDID IKNKKVIMRV DFNVPLKDGK ITDDTRIVEA LPTIKYAIEN NAVVILLSHL 
GRPKGERKPE FSLKPVSERL SELLGKQVTF VPELYGEEVK MAIDNAKPGD VILLENTRFD
KGETKNDPEL AKKWADLADI HVNDAFGTAH RAHASNVGIS QYIPSVAGFL MEKEIKFLSK
ATLNPEKPYV VILGGAKVSD KIGVITNLLN KADKILIGGA MMFTFLKALG KNVGSSLVEE
DKLDLAKRIL EEAKEKGVEF VLPVDAVCAQ KIESGVETKT FRINDGIPEG WMGLDIGPES
IKLFKEKISG AKTIVWNGPM GVFEIEDFET GTKEVAISIA AETEKGATTV IGGGDSAAAI
AKFNLKNKVS HVSTGGGASL EFLEGKELPG IASIASKKKI EN