Gene Tmel_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1263 
Symbol 
ID5297216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1271056 
End bp1271649 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content30% 
IMG OID640769536 
Productresponse regulator receiver protein 
Protein accessionYP_001306497 
Protein GI150021143 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTCTTGTAAT TGATGATGAA AGAAATGTAA GGATGCTAAT AGAAAAATTT 
TTGGAAGACT ATGAAGTGGA TTCATTAGTT AGCGCAGAAG AAGCTCTTAA GAAAATTTTA
GAAAATAACA CAAAATATGA TCTAATAATT ACAGACCTAA AATTGCCAGG AAAATCAGGG
CTTGAGTTAA TTAGAGAACT AAGAAAAAAT GTTTACAATT GTCCTATTTT AGTTGTATCA
GCATATGTAA AACCTGAAAT ACTTTCCGAA ATGTTCAAAT ACGAAAACGT TGACTTTCTT
TCAAAACCTT TCACGAAAGA TGAACTACAA ACCAAAGTCA AAGAACTTCT TGAAGAAGAA
AAAGAATCAT TTGATAAATC ACTGAGAATA GCAAACAAAT ATCTAGAAAC AGGAGATTTA
AACAAAGCTG AAAAAATGAT AAAACAAATG TTTGCAATTG CCCCTTCATC ACCTATACCC
CACTATTTGA TGTACGAATT GTTAAAAAAA AGAGGAAATG CAACACTTGC TGAAAAACAT
CTAAAAGCTG CAAAAGCCTT AGATGAGGTG GAAAATAATG AGAAAGATAA ATGA
 
Protein sequence
MKKILVIDDE RNVRMLIEKF LEDYEVDSLV SAEEALKKIL ENNTKYDLII TDLKLPGKSG 
LELIRELRKN VYNCPILVVS AYVKPEILSE MFKYENVDFL SKPFTKDELQ TKVKELLEEE
KESFDKSLRI ANKYLETGDL NKAEKMIKQM FAIAPSSPIP HYLMYELLKK RGNATLAEKH
LKAAKALDEV ENNEKDK