Gene Tmel_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1259 
Symbol 
ID5297804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1266954 
End bp1268072 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content29% 
IMG OID640769532 
Productaminotransferase, class I and II 
Protein accessionYP_001306493 
Protein GI150021139 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTAATA ATGTGCCGAA TAGAAAAGGA ACAAATTCTT TTAAATGGGA TTTAAAACCT 
AATGTGTTAC CATTGTGGGT TGCAGATATG GACTTTGAAG TATCAGAAGA AATAAAAGAA
GCAATTAAAA GTAGGGTAAA TCATGGGGTA TATGGTTACA CATTTAGACC AAAAAGTTAT
TATGAGGCTA TAATTAATTG GTTTAGAAAT TATCATGCTT TCGATATAAA AAGAGAATGG
ATAGTACCAA TTCCTGGTGT TGTACCAGGT ATATCTTTTG CCATTCAAGC TTTTACTTTA
CCAGGCGATA AAATAATAAT ACAACCGCCA GTTTATAGAC CTTTTCATGA AGTTGTTGTA
GAGTTAGGTA GACGTCTAAT ATATAATAAA CTAATTGAAA GTGATGGTTA TTATAAAATG
GATTTTGAAG ATTTAGAAAA TAAAATAGAT AAAGATGTAA AAATGTTGAT TTTATGCAGT
CCTCATAATC CGGTGGGAAG AGTTTGGAAA GAAGAAGAAT TGAAAAGATT AGGAGAAATT
TGTTTGAGAA ATAACATAAT TGTAGTATCT GATGAAATAC ATGCGGATAT TGTCTATAAG
AGAAAGCATA ATGTTTTTTT GGGCGTAAAT GAAAAATTTT TCAAAAATTC AATTGTTTTA
ACTTCTCCAA ATAAAAGTTT TAATATTGCT GGTTTGCAAT CTGGAAATGC AATTATACCT
AATAAATGCT TAAGGGAAAG GTTTGAGAAG ATTATCAATT CACAACATTT AGGATTGTCA
AATATTTTTG CTATAGTAGC TACTGAAGTT GCATATAATT ATGGAAGACA GTGGTTGGAG
AAATTATTAG ATTATCTTTA TCAAAATGTT TTGTTGGTAA AAGAATTTTT GGAAAAAGAA
CTTAATATAA AAGTTAGTGT TCCAGAAGGT ACTTTTCTTA TGTGGCTTGA TTTTAGAAAA
TTTGATGATG CGTATAATAG AGTTTTAAAT GCAGGTGTTT GGTTAAACGA TGGTAAAGAT
TTTGGACCAG GTGGTGAAGG ATTTCTTCGT ATGAACATAG CTACTTCAAG AGAGATATTA
AATGAAGCAC TAAAAAGGAT TAAATCTATA ACTTTTTAA
 
Protein sequence
MFNNVPNRKG TNSFKWDLKP NVLPLWVADM DFEVSEEIKE AIKSRVNHGV YGYTFRPKSY 
YEAIINWFRN YHAFDIKREW IVPIPGVVPG ISFAIQAFTL PGDKIIIQPP VYRPFHEVVV
ELGRRLIYNK LIESDGYYKM DFEDLENKID KDVKMLILCS PHNPVGRVWK EEELKRLGEI
CLRNNIIVVS DEIHADIVYK RKHNVFLGVN EKFFKNSIVL TSPNKSFNIA GLQSGNAIIP
NKCLRERFEK IINSQHLGLS NIFAIVATEV AYNYGRQWLE KLLDYLYQNV LLVKEFLEKE
LNIKVSVPEG TFLMWLDFRK FDDAYNRVLN AGVWLNDGKD FGPGGEGFLR MNIATSREIL
NEALKRIKSI TF