Gene Tmel_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1257 
Symbol 
ID5297333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1265015 
End bp1266418 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content28% 
IMG OID640769530 
Producthypothetical protein 
Protein accessionYP_001306491 
Protein GI150021137 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGG TGGCTTTATT AATTTTCATT TTTATATTTT CAATTATTAA CTTTACTATT 
ACTATCTATC CACTCGTAAA CAGAATAAAC ATCACACCCA ATCTTGATAA TACAGAAATT
ACAATTCAAG TAGCAAATCA ATCACCTGTA GCTGCAGAAG TCATAATAGA ACTTTCGGAT
TTTATAATCG AAGGTACAAA TTATTTATAT GATACAAAAG ATGAGTACAA ATATAGCATC
AAAAATTGGA TTACATTGGA ATCCACAGAA CTAACATTGC AACCTGGTAA GGTTATAGAT
TATCCTATAA AAATAAATAT ACCAAACAAC TTTGACGGAG CTCAAGCTTT TGGTGCAATA
CATTTTAAAC AAAAAGGTGA AAAAAGAGGT ATGTTTGAAA CTGTTTTTGA TTACATCTCT
TTAATTATTC TTGATTTCCC AAAATCAAAA ATAATGAGAC CTAGAATAAA AGATTTAAAA
GTTTACGACC TAACAGCAGA TGCTTCTAAA TCTCTTATTC AAAAATATGG AAACTTTGGA
AGTGTTATTG AAATAGCAAT CGAAAATGAA GGCAATGCTG TTCTCGCACT AAATGGAGAA
ATACGTTTAA TATCAAGAGC AATAAATAGG ATTATTACAT CCATTCCCAT ATCAAATTCT
GACTTTATAG TTTTTCCAGA AAGAACGGTA AAGTTTGAAT ATTTTGTACC TTATATATTT
CCAAATGGGA CATTTGAAGC TCAAATAGAT GGTGTTTCAC AAGGCCTTAG AGTAACTGCT
TCATCTAAAA TGAAAATTGA AAAATACAAG AACAGTAAAA ACGCATTACT TATTAATCCT
GAATTAATAC TGCTAAATAT AGATTCAAAA ATAAAAAACG CAAAAGTTAT TTTCCAAAAC
CTATCACCAA ATTCGTATGA GATAAGTTTA TCTACTAAAA ACAAAGCTAT GGAAATATTC
CCTAAAAAAC TCCGATTATC ACCCTATTCA AAAATAAACG GATTTATAAA ATTTGACAGT
AGAGAAACAA CTTTGAATGA TGGGGATAAC ATTTTTGAGT TTAAATCAAA TAACGAAAAT
GCAATTCTAT TTAACCGACC AAAAGTCATT TTAAGATACG GAAATTTAAT AACTGATTGT
ACTTCAGAAA TTACCAATGT AGCTACCGAT ACTTTTACAA TAAATATCAA AAATACGGGA
AACACAATAT TAATAACTAA AATAATTAGA AAAACTGGAT TGCAAACAAC TGATTTAACA
GATGAATTCT TAATCTTTCC TAAAGAGGAA AAAGGCATAA AATTAGATTT TGCTTTTAAT
GATATTGTTA AAAATAGTAC GTTTATTCTT TTTAAACCAT ACGGAAATGA TAAATTCACA
AATACAAAAG AAATTGGGAG ATGA
 
Protein sequence
MKKVALLIFI FIFSIINFTI TIYPLVNRIN ITPNLDNTEI TIQVANQSPV AAEVIIELSD 
FIIEGTNYLY DTKDEYKYSI KNWITLESTE LTLQPGKVID YPIKINIPNN FDGAQAFGAI
HFKQKGEKRG MFETVFDYIS LIILDFPKSK IMRPRIKDLK VYDLTADASK SLIQKYGNFG
SVIEIAIENE GNAVLALNGE IRLISRAINR IITSIPISNS DFIVFPERTV KFEYFVPYIF
PNGTFEAQID GVSQGLRVTA SSKMKIEKYK NSKNALLINP ELILLNIDSK IKNAKVIFQN
LSPNSYEISL STKNKAMEIF PKKLRLSPYS KINGFIKFDS RETTLNDGDN IFEFKSNNEN
AILFNRPKVI LRYGNLITDC TSEITNVATD TFTINIKNTG NTILITKIIR KTGLQTTDLT
DEFLIFPKEE KGIKLDFAFN DIVKNSTFIL FKPYGNDKFT NTKEIGR