Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1257 |
Symbol | |
ID | 5297333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1265015 |
End bp | 1266418 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 640769530 |
Product | hypothetical protein |
Protein accession | YP_001306491 |
Protein GI | 150021137 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGG TGGCTTTATT AATTTTCATT TTTATATTTT CAATTATTAA CTTTACTATT ACTATCTATC CACTCGTAAA CAGAATAAAC ATCACACCCA ATCTTGATAA TACAGAAATT ACAATTCAAG TAGCAAATCA ATCACCTGTA GCTGCAGAAG TCATAATAGA ACTTTCGGAT TTTATAATCG AAGGTACAAA TTATTTATAT GATACAAAAG ATGAGTACAA ATATAGCATC AAAAATTGGA TTACATTGGA ATCCACAGAA CTAACATTGC AACCTGGTAA GGTTATAGAT TATCCTATAA AAATAAATAT ACCAAACAAC TTTGACGGAG CTCAAGCTTT TGGTGCAATA CATTTTAAAC AAAAAGGTGA AAAAAGAGGT ATGTTTGAAA CTGTTTTTGA TTACATCTCT TTAATTATTC TTGATTTCCC AAAATCAAAA ATAATGAGAC CTAGAATAAA AGATTTAAAA GTTTACGACC TAACAGCAGA TGCTTCTAAA TCTCTTATTC AAAAATATGG AAACTTTGGA AGTGTTATTG AAATAGCAAT CGAAAATGAA GGCAATGCTG TTCTCGCACT AAATGGAGAA ATACGTTTAA TATCAAGAGC AATAAATAGG ATTATTACAT CCATTCCCAT ATCAAATTCT GACTTTATAG TTTTTCCAGA AAGAACGGTA AAGTTTGAAT ATTTTGTACC TTATATATTT CCAAATGGGA CATTTGAAGC TCAAATAGAT GGTGTTTCAC AAGGCCTTAG AGTAACTGCT TCATCTAAAA TGAAAATTGA AAAATACAAG AACAGTAAAA ACGCATTACT TATTAATCCT GAATTAATAC TGCTAAATAT AGATTCAAAA ATAAAAAACG CAAAAGTTAT TTTCCAAAAC CTATCACCAA ATTCGTATGA GATAAGTTTA TCTACTAAAA ACAAAGCTAT GGAAATATTC CCTAAAAAAC TCCGATTATC ACCCTATTCA AAAATAAACG GATTTATAAA ATTTGACAGT AGAGAAACAA CTTTGAATGA TGGGGATAAC ATTTTTGAGT TTAAATCAAA TAACGAAAAT GCAATTCTAT TTAACCGACC AAAAGTCATT TTAAGATACG GAAATTTAAT AACTGATTGT ACTTCAGAAA TTACCAATGT AGCTACCGAT ACTTTTACAA TAAATATCAA AAATACGGGA AACACAATAT TAATAACTAA AATAATTAGA AAAACTGGAT TGCAAACAAC TGATTTAACA GATGAATTCT TAATCTTTCC TAAAGAGGAA AAAGGCATAA AATTAGATTT TGCTTTTAAT GATATTGTTA AAAATAGTAC GTTTATTCTT TTTAAACCAT ACGGAAATGA TAAATTCACA AATACAAAAG AAATTGGGAG ATGA
|
Protein sequence | MKKVALLIFI FIFSIINFTI TIYPLVNRIN ITPNLDNTEI TIQVANQSPV AAEVIIELSD FIIEGTNYLY DTKDEYKYSI KNWITLESTE LTLQPGKVID YPIKINIPNN FDGAQAFGAI HFKQKGEKRG MFETVFDYIS LIILDFPKSK IMRPRIKDLK VYDLTADASK SLIQKYGNFG SVIEIAIENE GNAVLALNGE IRLISRAINR IITSIPISNS DFIVFPERTV KFEYFVPYIF PNGTFEAQID GVSQGLRVTA SSKMKIEKYK NSKNALLINP ELILLNIDSK IKNAKVIFQN LSPNSYEISL STKNKAMEIF PKKLRLSPYS KINGFIKFDS RETTLNDGDN IFEFKSNNEN AILFNRPKVI LRYGNLITDC TSEITNVATD TFTINIKNTG NTILITKIIR KTGLQTTDLT DEFLIFPKEE KGIKLDFAFN DIVKNSTFIL FKPYGNDKFT NTKEIGR
|
| |