Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1248 |
Symbol | |
ID | 5297438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1258924 |
End bp | 1259766 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 640769525 |
Product | response regulator receiver/SARP domain-containing protein |
Protein accession | YP_001306486 |
Protein GI | 150021132 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.705687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACATAC AAACATTTGG AGATTTTAAA ATTAATGGAA AGTTTATTAC TTTATCAAAA AAAGAAATAG AATTGTTGGT ATATTCTATA ATTAAAAATC CATATGCTAC AATTGAAAAT TTAATTGAGA ACGTATGGGC AGGATTTATT CAACCAAGCA GGAATGATGT GGGAACGTAT TTTTCAAAAA TTAACAAAAA GATTAATGAG TTTTTTGTAA GGCTAAGGAT AAAAAACGGA AAAGTTATAG TTGAAGGAAA AGTAGAGTTA GATACGAAGC TTTTTGAAAA AAACTCTCGG GATTTTCTAA ATGATAATTT AAAATTGTTT GATAAGATTT TAGAACTGTA CAAAGGTCCA TTTTTAGGTG GTATAGATTC TGTTTGGGTA GAAAATTACA GGGAATATTT TGAGGAATTG TTTTTTGAAA TGATGTTGGT AATGATAAAA GTAGAAAACA ATGCATCAAG AAGGTTGAAA ATTTTAGGTA ATTTGGTGAA TTTGTGTCTT GATTTAGAAA AAGTGAATGA TATTTTAAAT TTTGTTAGAA AAATAGAGTT TTCATATCAA AGCTATGTAA ACAGAGATAT ATTTGATTAT TTATATGAAA AAGATAAGAA TCTAAGACAT TCAAGATACA TAAAATTGAT TTTGAAATTA AAAGAAGCAA ATGAACTTTT ATTTAAAATA AGAAGAGGAG ATGTAATTTA TAAAGAAAGT GATAAGATTT ATTATATTTT ACTTGAGACA AGTGGAAATG ATGTAAATAC TGATATAAAA AAGTTTAGTT ATAGGTTAGT TAATATGGGA GTAAAGATAA AATATATAGG TATAGTTAAT TAA
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Protein sequence | MYIQTFGDFK INGKFITLSK KEIELLVYSI IKNPYATIEN LIENVWAGFI QPSRNDVGTY FSKINKKINE FFVRLRIKNG KVIVEGKVEL DTKLFEKNSR DFLNDNLKLF DKILELYKGP FLGGIDSVWV ENYREYFEEL FFEMMLVMIK VENNASRRLK ILGNLVNLCL DLEKVNDILN FVRKIEFSYQ SYVNRDIFDY LYEKDKNLRH SRYIKLILKL KEANELLFKI RRGDVIYKES DKIYYILLET SGNDVNTDIK KFSYRLVNMG VKIKYIGIVN
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