Gene Tmel_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1248 
Symbol 
ID5297438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1258924 
End bp1259766 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content24% 
IMG OID640769525 
Productresponse regulator receiver/SARP domain-containing protein 
Protein accessionYP_001306486 
Protein GI150021132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.705687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACATAC AAACATTTGG AGATTTTAAA ATTAATGGAA AGTTTATTAC TTTATCAAAA 
AAAGAAATAG AATTGTTGGT ATATTCTATA ATTAAAAATC CATATGCTAC AATTGAAAAT
TTAATTGAGA ACGTATGGGC AGGATTTATT CAACCAAGCA GGAATGATGT GGGAACGTAT
TTTTCAAAAA TTAACAAAAA GATTAATGAG TTTTTTGTAA GGCTAAGGAT AAAAAACGGA
AAAGTTATAG TTGAAGGAAA AGTAGAGTTA GATACGAAGC TTTTTGAAAA AAACTCTCGG
GATTTTCTAA ATGATAATTT AAAATTGTTT GATAAGATTT TAGAACTGTA CAAAGGTCCA
TTTTTAGGTG GTATAGATTC TGTTTGGGTA GAAAATTACA GGGAATATTT TGAGGAATTG
TTTTTTGAAA TGATGTTGGT AATGATAAAA GTAGAAAACA ATGCATCAAG AAGGTTGAAA
ATTTTAGGTA ATTTGGTGAA TTTGTGTCTT GATTTAGAAA AAGTGAATGA TATTTTAAAT
TTTGTTAGAA AAATAGAGTT TTCATATCAA AGCTATGTAA ACAGAGATAT ATTTGATTAT
TTATATGAAA AAGATAAGAA TCTAAGACAT TCAAGATACA TAAAATTGAT TTTGAAATTA
AAAGAAGCAA ATGAACTTTT ATTTAAAATA AGAAGAGGAG ATGTAATTTA TAAAGAAAGT
GATAAGATTT ATTATATTTT ACTTGAGACA AGTGGAAATG ATGTAAATAC TGATATAAAA
AAGTTTAGTT ATAGGTTAGT TAATATGGGA GTAAAGATAA AATATATAGG TATAGTTAAT
TAA
 
Protein sequence
MYIQTFGDFK INGKFITLSK KEIELLVYSI IKNPYATIEN LIENVWAGFI QPSRNDVGTY 
FSKINKKINE FFVRLRIKNG KVIVEGKVEL DTKLFEKNSR DFLNDNLKLF DKILELYKGP
FLGGIDSVWV ENYREYFEEL FFEMMLVMIK VENNASRRLK ILGNLVNLCL DLEKVNDILN
FVRKIEFSYQ SYVNRDIFDY LYEKDKNLRH SRYIKLILKL KEANELLFKI RRGDVIYKES
DKIYYILLET SGNDVNTDIK KFSYRLVNMG VKIKYIGIVN