| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1245 |
|---|
| Symbol | |
|---|
| ID | 5297131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1256382 |
|---|
| End bp | 1257266 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640769521 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_001306483 |
|---|
| Protein GI | 150021129 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1230] Co/Zn/Cd efflux system component |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGTC ATGAACACCA TCATGATGTA GTTGAAAGAA AATTAATATT TTCAGTTATT
TTTAATTTTT TAATTACTGC TTCGGAAATA ATTGGAGGAA TTGTGTCTGG AAGTTTAGCA
CTAATCTCAG ATGCTTTACA TAACTTAAGT GATACAGGAG CTTTGCTCAT AAGTTACTTT
GCAAGGAAAA TTTCTAAAAA GCCAGTTGAT AATAAATATA CATATGGGTA TAAAAGAGCA
GAACTTGTTG CTTCAGTTAT AAATATAACT GTTTTACTTT CGATTTCTTT TTCTTTGATT
TTAGAAGGGA TAAAGAAAAT TTTAAGTCCA GTTCAAATAA ATACTTCGAT TATGCTAATA
GTTGCATATG TGGGATTAGT AGGGAATCTT TTAACAGCAA TTTTATTATC ATCACATAGT
AAAGAAAACT TGAATTTAAA ATCAGCCTTT TTGCATATAC TAAGTGATAT GTTTTCATCT
GTGGGGATTA TAATTACAGG GCATGTTATG AGTTATTACA ATATATGGAT ATTGGATCCT
ATAATAACAT TTGTAATTTC TGGTTATATA ATAATAGAAT CGATAAAGAT TTTAAAAGAG
TCAATTAGAG TAGTTATGCA AGGAATACCC AAAGGGGTGG ATTTAGATAA AGTAAAAAAA
ATTATACAAA ACTTTTCATT TGTGAAAGAT GTACATCATA TTCACGTTTG GTCTTTGGAC
GGGATTGAAT TGTATCTAGA AATGCATGTG ACAGTAGATG GTAAAGACTA TGATGATTAT
TTAAGGAGAA TAAAAGAGAC GTTAAAAGAA CATGGTTTTA GACATTCAAC TATTCAACTA
GAACAGATAA ATTGTGGGGA AAATTGTATT GCTGAAATTC AATAG
|
|---|
| Protein sequence | MHSHEHHHDV VERKLIFSVI FNFLITASEI IGGIVSGSLA LISDALHNLS DTGALLISYF
ARKISKKPVD NKYTYGYKRA ELVASVINIT VLLSISFSLI LEGIKKILSP VQINTSIMLI
VAYVGLVGNL LTAILLSSHS KENLNLKSAF LHILSDMFSS VGIIITGHVM SYYNIWILDP
IITFVISGYI IIESIKILKE SIRVVMQGIP KGVDLDKVKK IIQNFSFVKD VHHIHVWSLD
GIELYLEMHV TVDGKDYDDY LRRIKETLKE HGFRHSTIQL EQINCGENCI AEIQ
|
|---|
| |