Gene Tmel_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1239 
Symbol 
ID5296705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1251409 
End bp1252227 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content34% 
IMG OID640769515 
Productindigoidine synthase A family protein 
Protein accessionYP_001306477 
Protein GI150021123 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2313] Uncharacterized enzyme involved in pigment biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAAGTA CAGTTATTGC ACATGGACTT CCCTATCCGG AAAATTTAGA GGTTTTTAGT 
AGATTAGAAG AGATTGTATA TAGTAATGGG TGTATTCCTG CAACTGTTGG AGTTTTAAAG
GGAAAGGTTA AAGTTGGATT ATCGAAAGAA GAAGTTATTG AACTTGTGGA AGATGATCCA
ATAAAAGTTG GTACAAGAGA ACTTCCATAT GCAGTTGCTC TGAAAAAATC TGCGGCTACC
ACTGTTAGTT CAACTGCAAG AATAGCAAAT TTAGCTGGTA TCGAAGTATT TGCAACTGGT
GGAATAGGAG GAGTACATAG AGGTCCCTGG GATGTTTCAC AAGACATACT GGAATTGGCT
GAAACAAGTA TAATAGTTGT TTCTGCAGGG GGTAAATCAA TTTTAGATGT AAAGAAAACA
TTGGAATTTT TGGAGACGTT TCAGATTTTA ACAGTGGGGT ATAAAACAGA ATATTTTCCA
ATGTTTTACA ATGGGTTATC GAAAGAAAAG ATTTATAGGG TAGATAGTGA AGAAAAGATT
GCAGATATAT TTGTACAAAA GAGAAAATTG GGAATAAAAA GTGCTATTTT GGTTGCAAAT
CCAATACCAA AAGAATTTGA AATAAGCGGT GAAGAAGTGG AAAAATATTT AGAGATCATT
GAAAAGGAGA TGGAAGGTGT AAAGGGAAAA GAAGTGACCC CTTATCTGTT GAAAAGACTG
GTTGAATTAT CAAATGGAAG GACTTTGAAA TCGAATATAA AGCTTCTTGA AAATAATGTT
GAACTTGCTT GTAAAATAGC GCAAAGTTTA AAAAAATAA
 
Protein sequence
MESTVIAHGL PYPENLEVFS RLEEIVYSNG CIPATVGVLK GKVKVGLSKE EVIELVEDDP 
IKVGTRELPY AVALKKSAAT TVSSTARIAN LAGIEVFATG GIGGVHRGPW DVSQDILELA
ETSIIVVSAG GKSILDVKKT LEFLETFQIL TVGYKTEYFP MFYNGLSKEK IYRVDSEEKI
ADIFVQKRKL GIKSAILVAN PIPKEFEISG EEVEKYLEII EKEMEGVKGK EVTPYLLKRL
VELSNGRTLK SNIKLLENNV ELACKIAQSL KK