Gene Tmel_1238 details

Gene Information

• Locus tag: Tmel_1238
• ID: 5296704
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1250585
• End bp: 1251337
• Gene Length: 753 bp
• Protein Length: 250 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 640769514
• Product: hypothetical protein
• Protein accession: YP_001306476
• Protein GI: 150021122

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA AAATTATTTT TTTGTTTTTA TTTCTTGTTT CTGTAGCTTT TTCAAGTGGG 
GTTATGATAT TTAAAGTGGA TAAAGTATTG CCAGATGATT TGTTTGAAGT TATTGGAACA 
AAAAGTAATA CTATATATTA CTTTAAACTA TTTGATGATG GTGTGCAAAA GGGATATGTG 
ATTAAGGGAT GGTATTTTAC ACCTAACAAT TTCATAGGAA AAACCAACGT AAAAATAATA 
AGTAGTTTAA GTAGCTTTTT AGTGGAGATT GGTAACGAAA GAAAGGGAAA TTATTCTGTT 
ATTCCAACAT TTATGTTAAT TTGCCCATCT GATTCAAAAG TTGTATTGGA TAAATACGAA 
ATTGATCAAA AAATGCTAAA AGCGGAGATA GGTGATATTG TTATGCCGAG ATTTAATGAA 
ATGGGTATCT ATACAGGTAT ATTTGAAAAA AAGTTTATCC AAAAAGATAT TTTCTCTCAA 
GATGATGAAA TATATGTTGT TATTTCTATG GGGTTGCGCA AGACAGGAGG TTATTCATTG 
GAGCTAGAAA GTTACGAAAT AAAAGAAAAT GAAATTATAA TTAATTTGAA TTTAAAAAGT 
CCTGGAAAAG GTGATATGGT AACCCAAGCT TTTACAATTC CATCATATAA TCTAAAATTG 
GGTAAATTGA AAAGGGGAAA ATATACTATA AAGGTTTTTG TGAGGAAAGG AGAAAACATA 
GAAAGGTTTT TAAAAAACAT TGAGGTAAAA TAG 

 

Protein sequence

MKKKIIFLFL FLVSVAFSSG VMIFKVDKVL PDDLFEVIGT KSNTIYYFKL FDDGVQKGYV 
IKGWYFTPNN FIGKTNVKII SSLSSFLVEI GNERKGNYSV IPTFMLICPS DSKVVLDKYE 
IDQKMLKAEI GDIVMPRFNE MGIYTGIFEK KFIQKDIFSQ DDEIYVVISM GLRKTGGYSL 
ELESYEIKEN EIIINLNLKS PGKGDMVTQA FTIPSYNLKL GKLKRGKYTI KVFVRKGENI 
ERFLKNIEVK