Gene Tmel_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1237 
Symbol 
ID5296828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1248920 
End bp1250542 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content34% 
IMG OID640769513 
Producthypothetical protein 
Protein accessionYP_001306475 
Protein GI150021121 
COG category[C] Energy production and conversion 
COG ID[COG1866] Phosphoenolpyruvate carboxykinase (ATP) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCAA CTAAAGAATA TTTTAAAATT GAGGAAATTT CTAAAACCAA TCCTATCTTT 
TCACCCATGC GGATGACGGT GGAAACTGCC TTTTACAGAA ATAACGTAGA GCTTGTTACA
TCTCCAAAAG AGGCATATAA ACTTGCCGAA AGTTCACCTG GAACAATTGT TACAAGTTGG
GAAGTTTATA AACCTGAAAT GTTAGGACTT GATAAAGAAA CAAGAATTTT ACTTTTTAAT
GATGGTGCAG TTACAGGGAG GTATGCGGCG GGAAGAAGAA TTTTGGGAAC AGCTGATGAT
AAGAAATATC TTGAGATTGT TAGGGAGGCT GTGTATAGGA CAAGGTATAG AAAGATGTAC
CATGGTATTT CTTTTTCTGG CCTTTCAAAA GAGTTTATGG TAAAAAATCA TATTTTGATT
CCTGAGGGTC ATGAAAACTT GTTGTACAAT TGGATTTTGA ATTTTCAATA TCCATCTCCA
GAGTACGAAA AGATGTACAG TGAATCGAAA GAATATAGTG AAGGAGATAT ATATGTGTTT
GTTGATCCAG ATTGGACACA TCCAGATTAT CCATTAGGTC TTGCAATTTT TGATCCAGAG
CATAATTGTG CAGCTATTCT TGGGATGAGA TATTTTGGAG AGTTAAAAAA AGGAACTTTG
ACACTTGCTT GGAGCATTGC AAATAGAAAT AATTTTGTTT CTTGTCACGG AGGATTAAAG
AGGTTAAAAA ATAGTAAAGT AGACTTTGTG GCTGCATTTT TCGGATTGTC TGGTTCTGGA
AAGTCAACTT TAACCCATGC AAAGCATTCA GATTATGAAG TTACCGTTTT ACATGATGAT
GCGTTTATAA TATCTACCGA AGATTTGTCA TCTGTGGCTC TAGAACCTTC ATATTTTGAT
AAAACAGCGG ATTACCCATC TATCTTTGAT GATAATAAAT ATTTGTTAAC TATACAAAAC
TGTGGTGCAA CAAAAGATGA AAATGGTAAT ATTGTTCCAG TTATGGAGGA TTTAAGAAAC
GGTAATGGAA GAGCTATAAA GTCAAAATTG TGGTCTCCAA ATAGAGTTGA TCGAATTAAA
AGCCCAATTG ATGCCATATT TTGGTTGATG AAAGATCCAA TTTTACCACC AATTGTGAAG
GTTGAGTCTC CGAGCGTTGC CTCATCTATG GGAGCACTTT TAACGACAAA AAGAACATCT
GCAGAGAAAC TTGATAGTAG TGTTGATCCA AGTGCTTTGG TTTTTGAACC ATATGCTAAT
CCGTTTAGAA CGTATCTATT AAGCGAGGAT TATTATAAGT TCAAGTTGTT ATTTGAAAAA
GGTGTAGCAT GTTATATTTT AAATACGGGG TATTTTTTGG ATAAAAAAGT TCCAAAACGG
CTTACAATAA AGCTTGTTGA AAAGGTAGTC GAAGATAAAA TAAATTGGAT TAAATGGTTC
GATGGTTTTT ATTATGCAGA TTTAGATGAT TTTGTTCCTG ACATGCAAGA TAAAACATAT
CTTCTTTCTT TGAAACAATC ATTTTTAAAG AGAAAGGATT TTGTTTTATC AAAGGTAGGA
ACAAGGGATG AATTGCCGAA GGAAGTTTTA ACGGCAATAG ATGGTATTAT AGGGCTGCTT
TAG
 
Protein sequence
MMATKEYFKI EEISKTNPIF SPMRMTVETA FYRNNVELVT SPKEAYKLAE SSPGTIVTSW 
EVYKPEMLGL DKETRILLFN DGAVTGRYAA GRRILGTADD KKYLEIVREA VYRTRYRKMY
HGISFSGLSK EFMVKNHILI PEGHENLLYN WILNFQYPSP EYEKMYSESK EYSEGDIYVF
VDPDWTHPDY PLGLAIFDPE HNCAAILGMR YFGELKKGTL TLAWSIANRN NFVSCHGGLK
RLKNSKVDFV AAFFGLSGSG KSTLTHAKHS DYEVTVLHDD AFIISTEDLS SVALEPSYFD
KTADYPSIFD DNKYLLTIQN CGATKDENGN IVPVMEDLRN GNGRAIKSKL WSPNRVDRIK
SPIDAIFWLM KDPILPPIVK VESPSVASSM GALLTTKRTS AEKLDSSVDP SALVFEPYAN
PFRTYLLSED YYKFKLLFEK GVACYILNTG YFLDKKVPKR LTIKLVEKVV EDKINWIKWF
DGFYYADLDD FVPDMQDKTY LLSLKQSFLK RKDFVLSKVG TRDELPKEVL TAIDGIIGLL