Gene Tmel_1232 details

Gene Information

• Locus tag: Tmel_1232
• ID: 5297849
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 1244987
• End bp: 1245439
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640769508
• Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
• Protein accession: YP_001306470
• Protein GI: 150021116
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
• TIGRFAM ID: [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATTGCTG TTATTGCGGG GAGCAAGAGT GATTCTCCTG TGGTTGATAA GGTAGTGTCC 
GTTTTAGAAA ATTTTGGAGT GAGCTATAGG ATAAAGTATT TATCTGCTCA CAGAACACCT 
AAACTTTTAG AGGAGTTTAT TGACGAGTGT GAAAAAGGTG GGGTAAAGGT TTATATTGCA 
GTTGCAGGTG GTGCGGCCCA TTTACCAGGA GTTGTTGCTT CAAAAACCGT AAAGCCTGTT 
ATAGGTGTTC CAGTAAAGTC CGAAGATTTA GGGGGGTTAG ATTCTTTACT TTCAATTGTT 
CAAATGCCCA ATGATATACC AGTGGCAACA GTGGGGATTA ACAGGGGGAA AAATGCGGCA 
ATTTTAGCTA TTGAAATGCT AGCTTTGGAT AACAAAGAAC TTTCAAAAAA GTTAAAAGAA 
TTCCGCTCAA AGCTTGTGGG GAAGTATCTT TAA 

 

Protein sequence

MIAVIAGSKS DSPVVDKVVS VLENFGVSYR IKYLSAHRTP KLLEEFIDEC EKGGVKVYIA 
VAGGAAHLPG VVASKTVKPV IGVPVKSEDL GGLDSLLSIV QMPNDIPVAT VGINRGKNAA 
ILAIEMLALD NKELSKKLKE FRSKLVGKYL