Gene Tmel_1209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1209 
Symbol 
ID5297524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand- 
Start bp1225689 
End bp1226318 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content30% 
IMG OID640769486 
Productredox-sensing transcriptional repressor Rex 
Protein accessionYP_001306448 
Protein GI150021094 
COG category[R] General function prediction only 
COG ID[COG2344] AT-rich DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAATC AGAAAAAAAT TCCAAAACCG GTTATTAAAA GGCTTGGGCT TTACTATAGA 
TGCCTTAATA GGTTATCTGA TGAAGGTATT GATTTTGTGG CATCAAAAGA TATAGCAGAA 
AGACTAGGAA TAAAATCTAG TCAAGTAAGA AAAGATCTTT CCTACTTTGG AGAATTTGGA 
AAACGAGGTG TTGGTTACAA TACATATGAA CTAATGACAA AGCTTGAAAA AATAATAGGT 
GTGAACAAGT ACTGGAATGT AATAGTTATT GGTGCAGGTA ACATAGGAAC AGCACTTGTA 
AACTACGAAG GGTTAAGAAA AGAAAAGTTT AGTATCATTG GTATCTTTGA TGCAGATAGG 
TCAAAAGTTG GTAAAAAAAT TGGAAAATTA ACCATTAAAC ATATTTCAGA ACTTGAAGAT 
TTCTTCAAAA AAAACATTGT GGAAATTGCT ATTATAGCAG TCCCTGAAAA CGCTGCACAA 
ATGATGGTTG AAAAACTTGA AAATTTAGGT ATAAAAGGAT TTATAAATTT CGCACCAATA 
AAATTAAGAA CAAAATTACC TGTTGAAGAT GTAGATATAA CTCTTTCTTT CAAGTCCCTT 
ACATTTAAAA TAGATAGAGA ATTAAAATAG
 
Protein sequence
MENQKKIPKP VIKRLGLYYR CLNRLSDEGI DFVASKDIAE RLGIKSSQVR KDLSYFGEFG 
KRGVGYNTYE LMTKLEKIIG VNKYWNVIVI GAGNIGTALV NYEGLRKEKF SIIGIFDADR 
SKVGKKIGKL TIKHISELED FFKKNIVEIA IIAVPENAAQ MMVEKLENLG IKGFINFAPI 
KLRTKLPVED VDITLSFKSL TFKIDRELK