Gene Tmel_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1193 
SymbolpyrB 
ID5296535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1212868 
End bp1214436 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content31% 
IMG OID640769470 
Productbifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit 
Protein accessionYP_001306432 
Protein GI150021078 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain
[COG1781] Aspartate carbamoyltransferase, regulatory subunit 
TIGRFAM ID[TIGR00240] aspartate carbamoyltransferase, regulatory subunit
[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTT TAGGTAGGAG TCTTACAGTT ATTAACGATT TTTCAGTAGA AGAACAGCTT 
TTTTTGTACG AAAAAACAAA AATTTTAAAA TCCTTATGGA AAGAAAAAAA AGACTACAGT
ATGTTTCAAA TCAAAAAAGA CGTTGGAATT TACATTATTT TTGTAGAACC TAGCACAAGG
ACAAAAGAGT CTTTTATCAA CGCCGCAAAA TTCCATAAAA ACGCAAAAGT AAACATATTT
GATTCCGAAC ACTCTTCTTT CAACAAAAAA GAAAGTTATG TGGATACATT CAATATGTTG
ACGGGATACA ATGACTACTC CATATTTATT GTTAGAACTA GATTAGAAGG TACTTGTAAA
TATTTAGACG AAAAGGTTTC AGATTTTGCA AAAAGACACG GTATTGAAAA ACCCGCATTT
ATAAACGCAG GTGATGGTAA ACATGAGCAT CCAACCCAAG AACTTCTCGA TGAATTTACA
TTTTTAGAAC AAATGAACTT TGATAATTCA TATATCCACA TAGCTTTAGT TGGTGACCTT
CTTCATGGAA GAACTGTACA TTCAAAAGTT AACGGTTTAA AAATCTTTAA AAACGTTTTA
GTAGATTTAA TTGCTCCAGA AGAGCTTGCA ATGCCAAAGC ATTATGTAGA AAAGATGAAA
AAGAATGGGT ATGAAGTTAG GATATTCGAT TCTATTGAAA ACTATCTTAA AGAAAAAAAC
ATAGCACCAA TTTGGTACTT TACAAGACTC CAACTAGAAA GAATGGGAGA AGACATATTA
GAAAAAGAAC ATCTACTGAG AAAAAGTGTT ACTTTTAGAA AAGATTTTTT AGAAAAACTT
CCTGAAAATG TCAAATTTTA TCATCCATTA CCAAGACACA AAATATATCC GACAATTCCA
ACATTTTTAG ATAACCTTCC TCTAAACGGT TGGGAAACCC AAGCCATTAA TGGTTATTGG
ACTAGAACCG TGTTACTATC TATGTTAGGT GGTGCATTAG AGGCAGAATT TGACACACGG
ACACAACCTG AAATCCCAGA TGAAGAATTT ATAACTCCTG CTCCTATTGT TGATGGAACA
AAGGGAATAC TAAAGGAAGG AAAAAGAGGT ATCAAACCCA TTGAATCTGG TACAGTTATT
GATCACATAG CAAAAGGAAA AACCAAAGAA CAAATATTTG AAACAATAGT AAAGATAAGA
AAAATTCTGA AATTGTATGA CTTGGATAGT GCTGATGGAA TTTTTAAATC GAATGACGGA
AACTTCAAAG GATACATAAG TTTACCTGAT AGATATTTAT CAAAAAAAGA AATTAAAAAA
CTCTCTGCTA TATCCCCAAA TACAACGGTA AATATTATCA AAAATTCCAG AGTAGTTGAA
AAATATAGGA TATCATTACC GCCATATATA TACGGGTTCG CCGAATTAAA ATGTAAAAAT
GAAAACTGTA TAACCAATCC AAAACACAGA GAAAATGCAG AAGCATTCTT TGTAAAAAAC
GAAAACGGAG AACTGGTCTG TAAATACTGT GAAACTCCTC ATACATTTGA AGAAATTTGG
AATATATAA
 
Protein sequence
MNFLGRSLTV INDFSVEEQL FLYEKTKILK SLWKEKKDYS MFQIKKDVGI YIIFVEPSTR 
TKESFINAAK FHKNAKVNIF DSEHSSFNKK ESYVDTFNML TGYNDYSIFI VRTRLEGTCK
YLDEKVSDFA KRHGIEKPAF INAGDGKHEH PTQELLDEFT FLEQMNFDNS YIHIALVGDL
LHGRTVHSKV NGLKIFKNVL VDLIAPEELA MPKHYVEKMK KNGYEVRIFD SIENYLKEKN
IAPIWYFTRL QLERMGEDIL EKEHLLRKSV TFRKDFLEKL PENVKFYHPL PRHKIYPTIP
TFLDNLPLNG WETQAINGYW TRTVLLSMLG GALEAEFDTR TQPEIPDEEF ITPAPIVDGT
KGILKEGKRG IKPIESGTVI DHIAKGKTKE QIFETIVKIR KILKLYDLDS ADGIFKSNDG
NFKGYISLPD RYLSKKEIKK LSAISPNTTV NIIKNSRVVE KYRISLPPYI YGFAELKCKN
ENCITNPKHR ENAEAFFVKN ENGELVCKYC ETPHTFEEIW NI