Gene Tmel_1191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1191 
Symbol 
ID5297836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand+ 
Start bp1210918 
End bp1211880 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content34% 
IMG OID640769468 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001306430 
Protein GI150021076 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATCT TTGAAGCAAA AAATTTGAAG GTTTACTATA AAACCAAAAG AGGGTATGTA 
AAAGCTGTGG ATAATATAAA TTTTTCAATA GAAAAGGGTC AGGTAGTTGG ACTTGTTGGT 
GAATCTGGTT GTGGAAAATC TACTTTTGGT CAAGGGATTT TAAAGATATT ACCGCCTTCT 
ACGTTTTATG ATGGTTATAT GAGTATTGAA GGGAAAAATT TAGTAAAAAT GAGTGAAAAA 
GAAATAAGGG TAATAAGAGG TAAGAAGATA GGGATGATAT TTCAAGATCC AATGACCTCA 
TTAAATCCTA TTATGAAAAT TGAAAAAATA TTTTACGAAG CACTAAAAAC ACATGAACCA 
GAAATAACGT TGGATGAGGC AAGGGAGAGA ACGGCAAAAG TCTTGGAAAA AGTAGGGATT 
GAACCTGAAC GAATGAAAGA ATATTCATTT CAGTTTAGTG GTGGAATGAG GCAGAGGGCG 
ATGATTGCGC TTTCGTTAGT TTTAAATCCG ACATTGGTGA TTGCTGATGA ACCTACTACC 
TCATTAGATG TAATCGTTCA AGCTCAAATT ATGGAATTAC TAGGTGAATT AAGAAAAGAA 
TATGATATGT CAATGATTTT GATTACACAT GATTTGGGAG TTGTTGCAGA AACAGCAGAT 
AAGATTTGTG TTATGTATGC TGGGCATATT GTTGAGGAAG CCAAAAGTGA AGATTTGTAT 
TATTCACCAA AACATCCATA TACGAAACTT TTATTAAAAA GCATTCCTAA TACGAATATT 
GATGATTTAA GTTTAAAATA TATTCCCGGC TCACCGCCTG ATTTATTAAA TCCACCAAAA 
GGTTGTAGAT TTGCCGAAAG GTGCCCATTT AAAAAAAGAA TTTGTGAGTT AAAGGAACCT 
GAGGTAGTGG AAGTTAATGA AACAAAGGTA AAGTGTTGGT TGTACAGTGA GGTGAAAGTA 
TGA
 
Protein sequence
MTIFEAKNLK VYYKTKRGYV KAVDNINFSI EKGQVVGLVG ESGCGKSTFG QGILKILPPS 
TFYDGYMSIE GKNLVKMSEK EIRVIRGKKI GMIFQDPMTS LNPIMKIEKI FYEALKTHEP 
EITLDEARER TAKVLEKVGI EPERMKEYSF QFSGGMRQRA MIALSLVLNP TLVIADEPTT 
SLDVIVQAQI MELLGELRKE YDMSMILITH DLGVVAETAD KICVMYAGHI VEEAKSEDLY 
YSPKHPYTKL LLKSIPNTNI DDLSLKYIPG SPPDLLNPPK GCRFAERCPF KKRICELKEP 
EVVEVNETKV KCWLYSEVKV