Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1190 |
Symbol | |
ID | 5297835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1210041 |
End bp | 1210913 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640769467 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001306429 |
Protein GI | 150021075 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.287104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGAAAA AATTTTTAAG TGAACGATTA GGTGAAATAA TAAGTGATTT ATTTAAAACG GGAACGGGGT TATTAACATT TATCGGCGCG ATAATATTAA TTTTTTACGT TATTTTAGCG GTTTTTGCCC CACAAATAGC ATCACATAAC CCTATAGAGA GAGTGGGAAG AACATTAACT CCTCCAAATG AACAATTTAT CTTTGGTACA GATAATTTAG GAAGGGATAT TTTTAGTAGA GTAATTTATG GTGCAAGAAT AGCGTTAACC ATTGCATTTA TTGCTGTTTT AATCGCGGCA GGTGTGGGAA TTCCTCTGGG GTTAATATCT GGATATGTGG GTGGAGCATT TGACAGGGTT GTAACTTTAA TTATGGATGC AATATATTCT TTTCCAGGAT TGATTCTTGC AATTGCAATT GCAGCAGTTT TGGGACCTGG GGTTATTAAT ATTTCCGTTT CAATTGCCGT AGTATATACA CCAACATATT TTAGGGTTAT TAGAAACCAA GTAAGTTCCA TAAAAAGTGA GCTTTACGTT GAGGCAGCAA GGGCACTGGG AGCAAAAAAT TATGAGATTC TTTTAAAATA TATTTTTCCT AATGTGTTAC CTTCTATTGT GGTAGTGCTT TCAATGAATC TTGCTGATGC CATTATGACA GAAGCTGGAT TGTCGTTTTT AGGTTTGGGT ATTGCCCCTC CAACACCAGA TTGGGGATTT GATTTGAGTA ATGGTCAAAG ATTTGTTTTA AGTAGAGCTT GGTGGGGATT ACTTTATCCA GGGCTTGCAA TTGTAACAGT TGTTTTGGGT TTTTCAATGT TTAGTGAAGG ATTAAACGAG TTATTAAATC CTACAATTCG TGAAAGAAGG TGA
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Protein sequence | MRKKFLSERL GEIISDLFKT GTGLLTFIGA IILIFYVILA VFAPQIASHN PIERVGRTLT PPNEQFIFGT DNLGRDIFSR VIYGARIALT IAFIAVLIAA GVGIPLGLIS GYVGGAFDRV VTLIMDAIYS FPGLILAIAI AAVLGPGVIN ISVSIAVVYT PTYFRVIRNQ VSSIKSELYV EAARALGAKN YEILLKYIFP NVLPSIVVVL SMNLADAIMT EAGLSFLGLG IAPPTPDWGF DLSNGQRFVL SRAWWGLLYP GLAIVTVVLG FSMFSEGLNE LLNPTIRERR
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