Gene Tmel_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1190 
Symbol 
ID5297835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1210041 
End bp1210913 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content36% 
IMG OID640769467 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001306429 
Protein GI150021075 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.287104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGAAAA AATTTTTAAG TGAACGATTA GGTGAAATAA TAAGTGATTT ATTTAAAACG 
GGAACGGGGT TATTAACATT TATCGGCGCG ATAATATTAA TTTTTTACGT TATTTTAGCG
GTTTTTGCCC CACAAATAGC ATCACATAAC CCTATAGAGA GAGTGGGAAG AACATTAACT
CCTCCAAATG AACAATTTAT CTTTGGTACA GATAATTTAG GAAGGGATAT TTTTAGTAGA
GTAATTTATG GTGCAAGAAT AGCGTTAACC ATTGCATTTA TTGCTGTTTT AATCGCGGCA
GGTGTGGGAA TTCCTCTGGG GTTAATATCT GGATATGTGG GTGGAGCATT TGACAGGGTT
GTAACTTTAA TTATGGATGC AATATATTCT TTTCCAGGAT TGATTCTTGC AATTGCAATT
GCAGCAGTTT TGGGACCTGG GGTTATTAAT ATTTCCGTTT CAATTGCCGT AGTATATACA
CCAACATATT TTAGGGTTAT TAGAAACCAA GTAAGTTCCA TAAAAAGTGA GCTTTACGTT
GAGGCAGCAA GGGCACTGGG AGCAAAAAAT TATGAGATTC TTTTAAAATA TATTTTTCCT
AATGTGTTAC CTTCTATTGT GGTAGTGCTT TCAATGAATC TTGCTGATGC CATTATGACA
GAAGCTGGAT TGTCGTTTTT AGGTTTGGGT ATTGCCCCTC CAACACCAGA TTGGGGATTT
GATTTGAGTA ATGGTCAAAG ATTTGTTTTA AGTAGAGCTT GGTGGGGATT ACTTTATCCA
GGGCTTGCAA TTGTAACAGT TGTTTTGGGT TTTTCAATGT TTAGTGAAGG ATTAAACGAG
TTATTAAATC CTACAATTCG TGAAAGAAGG TGA
 
Protein sequence
MRKKFLSERL GEIISDLFKT GTGLLTFIGA IILIFYVILA VFAPQIASHN PIERVGRTLT 
PPNEQFIFGT DNLGRDIFSR VIYGARIALT IAFIAVLIAA GVGIPLGLIS GYVGGAFDRV
VTLIMDAIYS FPGLILAIAI AAVLGPGVIN ISVSIAVVYT PTYFRVIRNQ VSSIKSELYV
EAARALGAKN YEILLKYIFP NVLPSIVVVL SMNLADAIMT EAGLSFLGLG IAPPTPDWGF
DLSNGQRFVL SRAWWGLLYP GLAIVTVVLG FSMFSEGLNE LLNPTIRERR