| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1189 |
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| Symbol | |
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| ID | 5297777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1209022 |
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| End bp | 1210029 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640769466 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001306428 |
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| Protein GI | 150021074 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0375099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGTTAA AAAGTTATAT AATCACACGA GTTATCCTTG CTGTACCTAT GATTTTTATA
CTGTTAGTTA TGATCTTTTT TATTTTACGA ATAATCCCAG GCGATCCAGT TTTAGCAATA
TTAGGTGGAA AAGCCCCATT AGAAGTGATT GAAGCAAAGA GGCATGAACT TGGGTTGGAT
AAACCTGTTA TTGTTCAGTT TTTTGATTAT ATAGGAGCTG TTTTTAAAGG GGATTTAGGT
GTTTCAACAT TAACCAATAG ACCAGTGTGG AATGAAATAA AGGATAGGTT TCCAGCAACA
TTGGAATTAA CAATATTTTC CTTTTTAATT GCTTTAATTA TAGGTGTTTT TTACGGAGCA
GAAGCTGCTT GGAGAAAAGA CAAAGCGTTG GATATTTCGG CAAGAGTTTA TTCCATTTTA
CTTTATGCTA TACCTGTTTT TTGGCTTGGG TTGATGTTTC AGCTTTTATT TGGTGTTTAT
TTAAGGTGGT TTCCAGTAGG TGGAAGGCTT TCTCCAAGGG TATCTTTGGA TATTAAAACA
GGACTTTTGT TATTGGATAG TATTATAACT TGGAATTGGG AAGCGTTTTT AGATGTGCTT
GAGCATTTAT TTTTACCTGG TTTAACTTTA GGGCTTGTGA TTTCAAGTAT ATTTTTGCGT
ATGGTAAGAA ACAATACGGT ATTAATGTTG TCTAAAGATT TTGTAAAAGC TGCTAAAGCA
AGAGGATTAA AACCCAAAGT TGTGTTGTAT GGGCATGCAG TGAAGAATGC GTTTGTTCCC
ATTTTTACAA TAATGGGAAT GCAATTTGCT CTTCTTTTAG CTGGAGCGGT ATTGACTGAA
ACAACGTTTT CCTGGCCTGG TATAGGAAGT TATTTAGTAT TGAAGATAAA GTATAGAGAT
TTTCCTGCTA TACAGGGAAC TATTGTGTTT TTTGCAATGT TTGTTGTAAT AATAAGTATT
TTAATAGATA TAGTAAACGC ACTTGTTGAT CCAAGAGTTA GATATTGA
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| Protein sequence | MSLKSYIITR VILAVPMIFI LLVMIFFILR IIPGDPVLAI LGGKAPLEVI EAKRHELGLD
KPVIVQFFDY IGAVFKGDLG VSTLTNRPVW NEIKDRFPAT LELTIFSFLI ALIIGVFYGA
EAAWRKDKAL DISARVYSIL LYAIPVFWLG LMFQLLFGVY LRWFPVGGRL SPRVSLDIKT
GLLLLDSIIT WNWEAFLDVL EHLFLPGLTL GLVISSIFLR MVRNNTVLML SKDFVKAAKA
RGLKPKVVLY GHAVKNAFVP IFTIMGMQFA LLLAGAVLTE TTFSWPGIGS YLVLKIKYRD
FPAIQGTIVF FAMFVVIISI LIDIVNALVD PRVRY
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