Gene Tmel_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1188 
Symbol 
ID5297776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1207476 
End bp1208975 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content35% 
IMG OID640769465 
Productextracellular solute-binding protein 
Protein accessionYP_001306427 
Protein GI150021073 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000019193 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT TTCTGATTAT TTTTGTTTTG ATGCTTGTTG CTCTTTCTTT TGCAAGTAGT 
GTTATTGTTG TTGGAACTAC CGATAAGATA AGGACACTTG ACCCGGCAAA TTGTTATGAT
TATTTTTCCA GTAATATTTT GCAAAATGTG TTAGCCGGAC CTGTGGATTA CGAAATTGGA
ACTGCTAATA TAAAACCATG GTTGTTTGAA AAGTGGGAAG TATCAAGTGA TGGATTAGTT
TACACTTTTC ACATAAGAAA AAATGCGTTT TTTGAAGATG GAACGCAGAT TGATGCCAAT
GTTTTTAAAT TTTCATTTGA TCGTGTTATG AGGTTAAACG GGGATCCAGC GTTTTTATTG
TCGGATGTGG TAGAAAAAAC GGAAGTAGTT GATAAGTTCA CATTTAGGGT GTATTTAAAA
AACAAATTTT CCGCGTTTGT ATCCGTTTTA GGGTATACAG TGGCATTTCC TGTAAATCCA
AAAGTTGCGC CTAAAGATAG ATTCTTAGAT TCAGCACCTT CTGCGTCTGG ACCGTATAGA
ATTAGTGAAT GGATTAGGGA CGTAAGGATT GTTTTGGAAG AAAATCCAAA GTATTTTGGT
CCAAAGCCAA AGACAAAAAA GATAATCATT CAATTTTACG AAAATTCCCA ACAGTTGAGA
CTTGCGTTGG AAACAGGAGA GGTAGATATA GCATACAGGC ATCTTGATCC AAGAGACATA
TTGGATTTAC AAAATGTTCC AGGTATAAAG GTTTATTTAG GTGCAAGTCC GCAAATAAGA
TATCTTGTTT TGAATGTAAA GCAAAAACCG TTTGATAATC CATTGGTTAG ACAAGCAATT
GCACTTGCTG TAGATAGAAA TGCAATTGTG AAGGATATTT TTGTAGATCT TGCAAAACCG
TTATACTCAA TGATACCAGC AGGAATGTGG AGCCATGAAG ATGTATTTCC AATGAGGGAT
TTACAAGCTG CTAAAAAAAT TTTAAAGGTT GCAGGTTATA ATGAAGATAA TCCTTTAATA
ATAGATTTGT GGTATACTCC TTCGCATTAC GGTACAACTG AAGCTGATGT GGCACAAGTT
TTGAAGAGCT CCCTTGAAGA AACTGGAATA ATAAAGGTGA ATATAAAATA TGCGGAGTGG
TCAACGTATG TTGAATATTT TTTGAACGGT ACTATGGGAT TATTCCTGCT AGGATGGTAT
CCAGATTATC TTGATCCGGA TGATTATTTG TGGCCATTCT TGAGTATAAG TGGTGCAAAA
TCACTTGGAA GTTTTTATGA AAACAAAATA GTTGAAGACC TTATGATTGC AGGTAGAGCG
GCAACTAACC AAAAAGCCCG TGAGGAAATT TATAAACTAG TTCAAAATTA TCATGCAGCT
GATATGCCTT ATATTCCTCT TTGGCAAGGG TCTGCCGATT GTGAAACCCA CGATTACATC
AAAGGTATAG TATTAGAGCC TACTCAAATA TTTAGATATT ACTTGTTAGA GAGAAAGTAA
 
Protein sequence
MKKFLIIFVL MLVALSFASS VIVVGTTDKI RTLDPANCYD YFSSNILQNV LAGPVDYEIG 
TANIKPWLFE KWEVSSDGLV YTFHIRKNAF FEDGTQIDAN VFKFSFDRVM RLNGDPAFLL
SDVVEKTEVV DKFTFRVYLK NKFSAFVSVL GYTVAFPVNP KVAPKDRFLD SAPSASGPYR
ISEWIRDVRI VLEENPKYFG PKPKTKKIII QFYENSQQLR LALETGEVDI AYRHLDPRDI
LDLQNVPGIK VYLGASPQIR YLVLNVKQKP FDNPLVRQAI ALAVDRNAIV KDIFVDLAKP
LYSMIPAGMW SHEDVFPMRD LQAAKKILKV AGYNEDNPLI IDLWYTPSHY GTTEADVAQV
LKSSLEETGI IKVNIKYAEW STYVEYFLNG TMGLFLLGWY PDYLDPDDYL WPFLSISGAK
SLGSFYENKI VEDLMIAGRA ATNQKAREEI YKLVQNYHAA DMPYIPLWQG SADCETHDYI
KGIVLEPTQI FRYYLLERK