| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1184 |
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| Symbol | |
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| ID | 5297773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1201960 |
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| End bp | 1202559 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640769461 |
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| Product | SOS-response transcriptional repressor, LexA |
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| Protein accession | YP_001306423 |
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| Protein GI | 150021069 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAC TTACTGAAAA GCAACAAAAG GTATTGGACT TCATTAAAAA CTACATACAA
CAAAACGGAT ATTCACCCTC TATTAGAGAT ATTGCAAAGC ATTTCAAACT TACACCTAGA
GGTGCTCATA TACACGTAAT TGCATTAGAG AAAAAAGGAT ACATTACAAG AAATCCTAAA
AACTCCAGAT CAATCTCACT TGTCAAAAGA CAAGAAAGTA TATTAATTCC TGTAAAAGGG
AAAATTTCCG CAGGTATGGG AATTGAAATG TTCGAAATAG TTGACGAAGA AATAGAAATT
CCCGTAAGAA TGATATCGGG CTTTGGAAAT TACTTTGCAC TAAAGGTTGA GGGAAATAGT
ATGATTGATG CGCATATTAT CAATGGAGAT TATGTAATAT TAAAAAAACA ATACAGAATT
CCAAATGGTC AGATAGCAGC TGTTGTATTT GACAATAAAG TAACACTTAA GAGATTTTAT
CACAAAAAAG ATAAAGTAGA ACTTGTACCA GAAAACAAAG ACATGAACCC GATAGTTTGT
GATGCAAAAG ATATAAAGGT TATTGGTAAA TTAGTGGGAA TAATACGATT TTATGAATAG
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| Protein sequence | MKKLTEKQQK VLDFIKNYIQ QNGYSPSIRD IAKHFKLTPR GAHIHVIALE KKGYITRNPK
NSRSISLVKR QESILIPVKG KISAGMGIEM FEIVDEEIEI PVRMISGFGN YFALKVEGNS
MIDAHIINGD YVILKKQYRI PNGQIAAVVF DNKVTLKRFY HKKDKVELVP ENKDMNPIVC
DAKDIKVIGK LVGIIRFYE
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