Gene Tmel_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1183 
Symbol 
ID5297772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1201610 
End bp1201948 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content29% 
IMG OID640769460 
Productanti-sigma-factor antagonist 
Protein accessionYP_001306422 
Protein GI150021068 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAACA TCGAAAGAAA AGATGGCATC CCAATAGTTC AAATAACAGG GGAAATTGAT 
ATATCAAATG CTCAGAACTT TAAAAAATTT GTACTTGATA ATATTTTAAA CAAAGGAGAA
AAAAATTGTA TCTTAGACTT TTCAAATATG AGTTATATAG ACAGCTCGGG ACTTGGCATA
TTGGTAAGTC TCCATAAAAG TTTTAAGATA AATGGTGGAG AAATAGTTCT TGTAAATTTA
AATAACAACG TTCAAAATCT TTTTAGGATG ACCAGTCTCG ACAAAGCTTT AAATCTTAAA
GGCTCCATAG ATGAAGCAAT AAAGTTTTTA AAACACTAA
 
Protein sequence
MFNIERKDGI PIVQITGEID ISNAQNFKKF VLDNILNKGE KNCILDFSNM SYIDSSGLGI 
LVSLHKSFKI NGGEIVLVNL NNNVQNLFRM TSLDKALNLK GSIDEAIKFL KH