| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1181 |
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| Symbol | |
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| ID | 5297724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1200210 |
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| End bp | 1201157 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640769458 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001306420 |
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| Protein GI | 150021066 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.298276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTG TCTTACAACT TAACGATTTT TACATCCCAA CACTTGAAAT TGACAATGGG
AAAATTGTTA AAAATCCAGA AATACCATCA AGATTAGAAA GTATAAAGAA CTTTGTATCG
AAAACATTTG AGACAATACC AGCTAAAGAA TATCCTATAA ATTATATACA CAACATTCAT
CCCAAATGGT ACGTTGAACA CGTTAAAAAA ATATCAAGCT CTACAAATAA CGAATATCTA
CCAGAAGTTT TTCTAAAGGA TAGAATTTTA GATTCTGGAA CTCCTGTTAC ACCAGTTACA
TATAAAGCTG CATTAAATGC ATATTATGCA TCCATCACTG GCGCAAACTT AGATGAAAAA
TACGTTTATA TTTTAACAAG ACCACCTGGG CACCATGCAT CTAAAGATTT TGCAGGTGGA
TATTGTTTTT TTAACAACGC AGCGATAATT GCAAAATATC TCCAGAGTAT TTATCAAAAA
AGGATTTGTA TACTTGACAT TGATTTTCAC CACGGAAATG GTACTCAAGA AATTTTTTAT
TATGATCCAA ACATAGTATA TATTTCAATC CATGGGACTC CAGAAAAGTT CTTCCCGTGG
ATTTCCGGTT TTAGAGAAGA AACTGGTAGT GGAGATGGTA AAGGAACAAA TTTTAACTTT
CCATTAGATG GTGGAACAAA TTGGCGGGAA TACAAAGTTG TTTTTGAAAT GGCACTTGAA
ATAATTGAAA AAGTTTCACC ATATAAACTT ATTGTATCAC TGGGATTTGA TACCCATATA
AATGATCCCA TGGGACATTT TAATCTGCAA GATGAAGACT ACAAACATAT TGGAGTAATG
TTAAAAAAAC TTGATATTCC AATTATATTT GTACAAGAAG GAGGATATAA TAAAGAATCA
AATAAAGAAG CAGCAAAAAA TTTATTTTTC ACATTCGGAA AGGAGTGA
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| Protein sequence | MKVVLQLNDF YIPTLEIDNG KIVKNPEIPS RLESIKNFVS KTFETIPAKE YPINYIHNIH
PKWYVEHVKK ISSSTNNEYL PEVFLKDRIL DSGTPVTPVT YKAALNAYYA SITGANLDEK
YVYILTRPPG HHASKDFAGG YCFFNNAAII AKYLQSIYQK RICILDIDFH HGNGTQEIFY
YDPNIVYISI HGTPEKFFPW ISGFREETGS GDGKGTNFNF PLDGGTNWRE YKVVFEMALE
IIEKVSPYKL IVSLGFDTHI NDPMGHFNLQ DEDYKHIGVM LKKLDIPIIF VQEGGYNKES
NKEAAKNLFF TFGKE
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