Gene Tmel_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1169 
Symbol 
ID5297698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1189694 
End bp1190176 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content31% 
IMG OID640769446 
ProductNADH dehydrogenase (ubiquinone), 24 kDa subunit 
Protein accessionYP_001306408 
Protein GI150021054 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.516989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTCCA AAATTAAAGA TATTATTTCA GAAGCAAAAA ATGAAAGGTT AGAAGAAAAA 
GATATTTTAA TCTATACGCT TCATAAAATA CAGGACATTA GTGAAAATAA CTTTATATCT
GAGGAAGCTG CAAAGATTGT TAGTGAAGAA CTAAATATAC CGTTATCCAA AGTATACGAA
GTTCTAACTT TCTACAGTAT GTTCTCTACC AAAAAAAGGG GAAAATACTT AATTAGAGTA
TGCTCAAGCC TTCCATGTCA TGTGGCAAAT GGAAGGGAAA TAATAAAAAT ATTAAAAGAA
GAACTGAAAA TAGATTTTAA CCAAACCACA GCAGATGGAA TGTTTACACT TGAAGAAACG
GGATGTTTAG GTTTATGTGG AGTTTCTCCG GTTATTATGA TTAACAACAA ATATTACGGT
GATCTCACCC CAGAAAAAGT AAAAGAATTA ATAAACAAAA TAAAAAGGGG TGAGGAGATA
TGA
 
Protein sequence
MLSKIKDIIS EAKNERLEEK DILIYTLHKI QDISENNFIS EEAAKIVSEE LNIPLSKVYE 
VLTFYSMFST KKRGKYLIRV CSSLPCHVAN GREIIKILKE ELKIDFNQTT ADGMFTLEET
GCLGLCGVSP VIMINNKYYG DLTPEKVKEL INKIKRGEEI