| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1160 |
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| Symbol | |
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| ID | 5297020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1181936 |
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| End bp | 1183468 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640769438 |
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| Product | phosphodiesterase |
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| Protein accession | YP_001306400 |
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| Protein GI | 150021046 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATAT ATATACTTTC TGGGTTAGGT GTTCTTGTTG GTGCATTACT GGGATATGTT
GTGGCAAAAA GAAATATTGA AAAACAATTG TTGTTAGCGA AAAAAGATGC AGAACATATA
ATAAAAGATG CGGAAAAAGA GGCAAGTGAA ATAAAGAAAA AGGCAGTAAT TGAATCAAGA
GAAGAGTTAC ATAAATTAAG GGAAGAATGG GAAAAAGAGA GAAAAGAAAG AGAAGAGGAA
ATAAGATACC TTGAAGAAAG ATTAATAAAG CGAGAAGAAA TGGTTTCTAA AAGAGAAGAA
CTATTGGATA AAAAAGAAAA TTATGTTGAA GAATTAAGAA AAGAATTAGA TCAAAGGCAA
AGAGACTTGG AAGCAAAAGA AAAGGAACTA ACGGAAAGGT TTGAAAAATT AGCGGGAATA
ACACCGGCGC AGGCAAAAGA AATGGTTCTT GAAGAAGCAA GGGAGAAATA TGAATATGAA
ATTGCAAAGG TTTATTCTCA GATAAAAGCA AGATATGAAG AAGACTCGGA AAAGTATGCA
AAAAAGGTTA TAGCCGATGC AATACAAAGA TATGCACCAG AGTATTCGGG AGAGGTTACT
GTGAGCACAA TTATGTTACC AAATGATGAT ATGAAGGGAA GACTGATTGG AAGAGAAGGT
AGGAATATAA GGGCATTTGA AAAAGTAACG GGTGTAGACC TTATAATTGA TGACACACCA
GAAATGGTTA CGGTAAGCTG TTTTAACCCC TTAAGAAGAG AAATAGCAAA AAGAACAATA
GAAAAATTAG TTGCGGATGG AAGAATTCAT CCTACAAGGA TAGAAGAGAT GTATGAAAAG
GCAAAAGCTG AAGTTGAAAA GATTATTAGA GAAGCTGGAC AAGAAGCCAC TTTTGTGACA
GGTGTAGGAG GACTTCATCC AGAAATAATT AAACTTCTTG GTAGGTTAAA GTTTAGAACA
AGCTATGGAC AGAATGTTCT AAATCATTCA ATAGAAGTGG CACTTATTGC TGGATTAATT
GCATCGGAAC TTGGGGTAAA CGTCGAGAAA GCAAAACGTG GAGGATTATT ACACGATATT
GGAAAGGCAC TTGATCACGA GGTTGAAGGT TCTCATACAG TTATAGGCGC GGAGATTTTG
AGGAGGTATG GGGAAAGTAG GGAAATAATT AATATGGTAA TGGCACATCA CGGGGAAGAA
GAACCAGTGA CTCCTGAAGC GGTAATAGTA GCCGCTGCCG ATGCATTGTC TGCAGCACGA
CCTGGAGCAA GAAGGGAGGA TGTGGAAAAT TACATCAAAA GGCTTATTAA ACTTGAAGAG
ATTGCAAAGA GTTTTAAATA TGTGGAAAAT GCTTATGCTA TACAGGCTGG AAGAGAAGTA
AGGGTGATAG TACAACCAGA TAAAATTGAT GATGTGCTTG CGGATAAATT GTCACATGAT
ATAGCGATAA AAATAGAAGA AGAGTTACAA TACCCCGGTG TGCTTAAAGT AGTGGTTATT
AGGGAAAAAA GAAGTGTGGC TTATGCAAAA TAA
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| Protein sequence | MLIYILSGLG VLVGALLGYV VAKRNIEKQL LLAKKDAEHI IKDAEKEASE IKKKAVIESR
EELHKLREEW EKERKEREEE IRYLEERLIK REEMVSKREE LLDKKENYVE ELRKELDQRQ
RDLEAKEKEL TERFEKLAGI TPAQAKEMVL EEAREKYEYE IAKVYSQIKA RYEEDSEKYA
KKVIADAIQR YAPEYSGEVT VSTIMLPNDD MKGRLIGREG RNIRAFEKVT GVDLIIDDTP
EMVTVSCFNP LRREIAKRTI EKLVADGRIH PTRIEEMYEK AKAEVEKIIR EAGQEATFVT
GVGGLHPEII KLLGRLKFRT SYGQNVLNHS IEVALIAGLI ASELGVNVEK AKRGGLLHDI
GKALDHEVEG SHTVIGAEIL RRYGESREII NMVMAHHGEE EPVTPEAVIV AAADALSAAR
PGARREDVEN YIKRLIKLEE IAKSFKYVEN AYAIQAGREV RVIVQPDKID DVLADKLSHD
IAIKIEEELQ YPGVLKVVVI REKRSVAYAK
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