Gene Tmel_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1158 
SymbolrecA 
ID5297637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1180518 
End bp1181567 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content36% 
IMG OID640769436 
Productrecombinase A 
Protein accessionYP_001306398 
Protein GI150021044 
COG category[L] Replication, recombination and repair 
COG ID[COG0468] RecA/RadA recombinase 
TIGRFAM ID[TIGR02012] protein RecA 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATA ATAAACAAAA AAAGGAAGTT TTGAAAAAAG CTATTGGAAA GATTGAAAAA 
ACGTTTGGAA AAGGCTCTAT AATGTTCTTA GGGGAAGAAA ATGCTGTGCA AAATATTGAA
ACAATATCCA GTGGTTCTGT TGCGATTGAT ATAGCTTCTG GTGTTGGTGG TTATCCAAGA
GGGAGGATTG TGGAGATTTA CGGTCCAGAA TCTAGTGGAA AAACAACAAT TGCATTGCAT
GCGATAGCTT CTGCTCAAAA AAATGGTGGT ATTGCTGCAT TTGTAGATGC AGAACATGCT
CTTGATCCAG TATATGCAAA GAATTTAGGT GTAGATGTTG AAAATTTACT TATTGCACAG
CCGGATTACG GAGAACAAGC ACTTGAAATA GTGGATGAGC TTGTAAGGAG CAATGCCGTA
GACCTTGTAG TTATAGATTC TGTAGCAGCG TTGGTCCCAA GAGCCGAAAT TGAAGGTTCT
ATGGGGGATG TTCAAGTAGG GCTTCAGGCA AGATTAATGT CCCAAGCGTT GAGAAAATTA
GCTGGAAATA TTAACAAATC AAAAGCAGTT GTTATATTTA TTAACCAAAC GCGTATGAAA
ATAGGAGTTA TGTATGGAAA TCCAGAAACT ACTACAGGTG GAGTAGCTTT GAAATTTTAT
TCTACAATGA GGTTAGAAGT AAGAAGTATT GGAAAAATAA CGGAAGGGAA AGAAAGTATA
GGAAATCAAG TTAGGATTAA ATTTGTAAAG AATAAAGTTG CACCTCCTTT CAAAGAGGCA
ATTGTTGATG TGATATACGG AAAGGGAATT GTAAGGGAAA ATGAGTTGTT TAATCTTGCT
GTTGATGAGG GACTTATTTC TAGGCGCGGG AGTTGGTTTT CATATGTTGA TTCAACAGGG
ACAGAACATT CATTGGGACA AGGGAAGAAT AATTCATTGG ATTATCTTTT GAATCATCCA
GAGTTACTTG ATGAAATAGA AGAAAAGATA AGAGAAAAAC ATGGACTTTT AAAGAAAGGT
GAAAAAAGTG AAGAGGAATC CCTTGAATGA
 
Protein sequence
MSDNKQKKEV LKKAIGKIEK TFGKGSIMFL GEENAVQNIE TISSGSVAID IASGVGGYPR 
GRIVEIYGPE SSGKTTIALH AIASAQKNGG IAAFVDAEHA LDPVYAKNLG VDVENLLIAQ
PDYGEQALEI VDELVRSNAV DLVVIDSVAA LVPRAEIEGS MGDVQVGLQA RLMSQALRKL
AGNINKSKAV VIFINQTRMK IGVMYGNPET TTGGVALKFY STMRLEVRSI GKITEGKESI
GNQVRIKFVK NKVAPPFKEA IVDVIYGKGI VRENELFNLA VDEGLISRRG SWFSYVDSTG
TEHSLGQGKN NSLDYLLNHP ELLDEIEEKI REKHGLLKKG EKSEEESLE