| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1152 |
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| Symbol | |
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| ID | 5297310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1174993 |
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| End bp | 1177071 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640769430 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001306392 |
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| Protein GI | 150021038 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0148359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAGT TTTATGAAAA ACATGCAAAG AAGATAATTG TTTTGCTTGT GATTTTGAAT
ATAGCCTTTT TTTTAGGGAT GCTGAGAATA AGATTTAACA CGGATTTTTC TCTTTTTAGA
TTAGAAAATT CAAAGTATGA GAAGATTTTA AAGGAATTGG AAAAGGATTT TTCGACAGAA
AATCAATTGA ATGTCTTAAT AGAATTTGAT GAAAATCCGT TGAGTTTAGA TGGCATAAGA
AAGATAAAGG AGTATGATAA AAAATTAAAG AGTATTGATG GAATTGGAAA AATCATTTCT
CCAGTTCCAG ATGAAATTCC CTTTGGTTTT AGGAAGGTAA ATGTTGAAAA TATAAATGAG
GAAAATTTTG AGATTGTAAA AAATTTTCTG GAAAAGTTAG ATATTATTAG TCAAAGATAT
GGAAAATTCT ATGTTATATA TTATATATTT CCTACCAAGA GGGTAGTTTC AAAGATAGAT
GAGGTTATAG ATTTACCGCA CTATTTTGCT GGAAGTACGT ATTTACAAGA AAAAATGTAT
GATTATCTAT TGTTAATAGT TTTTACCCTG CCACCGCTTG CCATAGTTAC TATATTTTTA
GTATTTAGAT GGCGATTAGG TGGATTTAGA CCGACATTAT TTTCCGTGTT ACCTGCAGGT
ATGGGGGCGC TGTGGACTTT GGGGATAATT GGTTGGACTG AAAGGGAGAT ATCCATTCTA
ACAATACTTG CTCCTATATT TACAATAGTA ATGGGTAGTG CAGATGGCCT TCATTTTGTA
TCGCATTTTA TGGATAACAA GGAAAATAAA GATAAATTTT CTGCGTTATC TGAAACTTTA
AAAAGCACTG GGTTTGCAAT GATTCTTACT ACAATAACTA CAGTTGCGGG TTTTTTATCG
CTTGCCATTA TTGATTCTGA ATCATTAGCG CAGATGGGTA AATTTAGTGC AATTGGTGTT
GCTTTTGCGG GAATTGCAAC ATGGGTATTT CTGCCTGTGG TTCTTTTAAA AAGTGATATA
GGGGTAAAAA AAGAAGATAG TAAAATTTCA AGAACTTTTA GGAATATGAT TGGAAAAAGG
GCAGTTTTCA TTACAATTTT GATAGTGGTT GTTTTCTTTC CGGGTGTTTA TTTTTTGGAT
AGGGAGTTTT ATATGCTTGA TATTTTTAAA GATTACACTC AAGTTAAGAA AAATTCGGAT
GTTGTTCAAA AAGTTGCAGG TATAACTGTT CCTGTGTTTG GATATTTTAA GACGGAAAAT
TTGTTATCTG CCGAATTTGC TAACAAGGTC TTGGATTTTG AGAAAGGATT AAAGGCAATA
TCTTTTTACG ATATAATGAA AAATATTAAT GAAAAAATTT TTGGACAAGA GGGTTATCCA
GACAACGTTG TTCGTGTGAG ATTTTTGCTA AATTTGTTAC CACCAATATA CGATAACTTT
GTAAATTTAA AAATATTTTC TGGAAGAGTC CTAATATTTC CAGAAGAAAT AAATAGTAAG
GTATTAAATG AAATTGAAAA AAAGGCGCCA GAGGATATAA AAATTACAGG GGCTCCGTAC
ATTATGAAGG AGATGAATGA TGTAATAGTT CCTCAACAGA TAAAATCACT TTTATTAGCT
GTATTTTTGG TCTTTCTCAT AGTTTTTGTG AGGTTAAAGA ATTTGAAAGA ATCTTTTTTT
GCTATTTTAC CAATTTCTTT GACCTTAATA GTAATGTTTG GTTTTATGGG AATTTTTGGC
ATTAAGTTAA GTATTATTAC GGCTACTATG GGAAGTATAG TTGTGGGTGT TGGAATAGAT
TATGCAATAC ATTTTATAGA AAGTTATAAT TATTACTTAA GATTATTGAG GGATAAAAAA
CGTGCCATTG AAAAATCTTT TGATGTAACA TCTAAACCTA TACTTGCAAA TGCTTTAGGG
CTTTCTATAG GACTTTCTGT ACTTTTGTTG TCTCCATTAA AAATCCACGA ATATCTGGTA
GGTTTAATGT GGGTTTCTAT GATTTCGAGT GCCATTTTTA GCTTAACACT TTTGCCCACA
CTATTGTTTG TTGCAAATCT GAAAAAAAAT GGAGTATAA
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| Protein sequence | MSKFYEKHAK KIIVLLVILN IAFFLGMLRI RFNTDFSLFR LENSKYEKIL KELEKDFSTE
NQLNVLIEFD ENPLSLDGIR KIKEYDKKLK SIDGIGKIIS PVPDEIPFGF RKVNVENINE
ENFEIVKNFL EKLDIISQRY GKFYVIYYIF PTKRVVSKID EVIDLPHYFA GSTYLQEKMY
DYLLLIVFTL PPLAIVTIFL VFRWRLGGFR PTLFSVLPAG MGALWTLGII GWTEREISIL
TILAPIFTIV MGSADGLHFV SHFMDNKENK DKFSALSETL KSTGFAMILT TITTVAGFLS
LAIIDSESLA QMGKFSAIGV AFAGIATWVF LPVVLLKSDI GVKKEDSKIS RTFRNMIGKR
AVFITILIVV VFFPGVYFLD REFYMLDIFK DYTQVKKNSD VVQKVAGITV PVFGYFKTEN
LLSAEFANKV LDFEKGLKAI SFYDIMKNIN EKIFGQEGYP DNVVRVRFLL NLLPPIYDNF
VNLKIFSGRV LIFPEEINSK VLNEIEKKAP EDIKITGAPY IMKEMNDVIV PQQIKSLLLA
VFLVFLIVFV RLKNLKESFF AILPISLTLI VMFGFMGIFG IKLSIITATM GSIVVGVGID
YAIHFIESYN YYLRLLRDKK RAIEKSFDVT SKPILANALG LSIGLSVLLL SPLKIHEYLV
GLMWVSMISS AIFSLTLLPT LLFVANLKKN GV
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