Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1138 |
Symbol | |
ID | 5298469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 1161915 |
End bp | 1163291 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640769416 |
Product | glutamate synthase (NADPH), homotetrameric |
Protein accession | YP_001306378 |
Protein GI | 150021024 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric [TIGR01318] glutamate synthase small subunit family protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTAA AAGATAGAAT TAAACCAATT GTAAGAGAAC TTAATGAAAG AATAAAAGAC TTTAATGAGG TATCATTGGG ATATACATGG GAACTTGCAG TTGAAGAAGC AAAAAGATGT TTGCAATGTA AAATTCCCAC TTGTGTACAA GGCTGCCCTG TTGGAATAGA TATCCCAGGA TTTATAAAAG AAATTGTCCA AGGAAACTTT CAAAATTCCT ACAAAATATT GAAAAAATAC AATTCACTTC CCGCTGTATG CGGTAGAGTT TGTCCTCAAG AAATCCAATG TGAAGGTTCA TGTATCTTAA ACAAAACAGG GAAACCAATA GCAATTGGAC TTCTCGAGAG ATTTGTGGCA GATTGGGCAT CTGAAAATGC TATTGAAGAA AAAATTACTA TAGAGAAAAC TACAAATAAG AAAGTAGCGG TTATAGGTGC TGGACCCGCT GGACTTACAA ACGCTTCTGA ACTTGCAAAA TATGGATTCA AAGTAGATAT ATATGAAGCA TTTTCAGAAC CCGGTGGAGT ACTAATCTAT GGAATACCTG AATTTCGTTT ACCAAAATCT ATTGTAAAAA GGGAAGTAGA TTTCTTAAAA AAACTTGGAG TAAATATTAC CTTAGATATT CCAGTAGGTT ATGCAATTGA ACCTGAAGAA CTCATTGAAA AATACGATGC CATATTTATT GGAGTAGGTG CTGGTACTCC AAAATTTATG AATATTGCAG GCACAGAACT AAATGGTGTA TATTCGGCAA ATGAATTTTT AACCAGAATA AACCTGATGA AGGCATTTAA ATTCCCCGAA TATGATACTC CGGTAAAAAT AGGAAAAAAA GTCGTGGTAA TTGGTGGTGG AAATACCGCT ATGGATGCCG CAAGAAGTGC ATTTAGATTG GGTGCAGAGG TAACTATAGT TTACAGAAGA AGTGAAAAAG AAATGCCGGC AAGAAAAGCA GAAATCCATC ATTCAAAAGA AGAAGGAATA AAATTTCAAC TCTTAACCCA GCCAATAGAA TACGTTGGGG ATGAAAATGG AAAACTAAAA GCTATAAAAT GCGTAAAGAT GAAGTTGGGA GAACCAGATA CAGGGGGTAG AAGAAGACCT CTTCCCATAG AAAACAGTGA ATTCTTTATA GAAGCAGACA TAGCTATAGA AGCTATTGGA ACAAACTCCA ATAAGTTATT GCTCTCAAAG TTTAAAGGAT TGGAATTAAA TAAATGGGGA TACATCAAAA CAGATGAATT TGGTCAAACA AGTATCCCAA AAGTATTTGC AGGTGGAGAT ATTGTAACTG GTTCTGCAAC TGTTATACTT GCAATGGGAG CCGGAAAAAA AGCAGCAAAA AAGATGAAAG AATTTTTAGA AACCTAA
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Protein sequence | MAVKDRIKPI VRELNERIKD FNEVSLGYTW ELAVEEAKRC LQCKIPTCVQ GCPVGIDIPG FIKEIVQGNF QNSYKILKKY NSLPAVCGRV CPQEIQCEGS CILNKTGKPI AIGLLERFVA DWASENAIEE KITIEKTTNK KVAVIGAGPA GLTNASELAK YGFKVDIYEA FSEPGGVLIY GIPEFRLPKS IVKREVDFLK KLGVNITLDI PVGYAIEPEE LIEKYDAIFI GVGAGTPKFM NIAGTELNGV YSANEFLTRI NLMKAFKFPE YDTPVKIGKK VVVIGGGNTA MDAARSAFRL GAEVTIVYRR SEKEMPARKA EIHHSKEEGI KFQLLTQPIE YVGDENGKLK AIKCVKMKLG EPDTGGRRRP LPIENSEFFI EADIAIEAIG TNSNKLLLSK FKGLELNKWG YIKTDEFGQT SIPKVFAGGD IVTGSATVIL AMGAGKKAAK KMKEFLET
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