| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1137 |
|---|
| Symbol | |
|---|
| ID | 5298468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 1160409 |
|---|
| End bp | 1161719 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640769415 |
|---|
| Product | alkaline phosphatase |
|---|
| Protein accession | YP_001306377 |
|---|
| Protein GI | 150021023 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1785] Alkaline phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG GATTACTTGG ATTATTTTTA TTGGTATCTT TGGTTAGCTT TGCAGTAACT
AACGTTATCT ATATGGTAGG AGATGGTATG GGAATTAATC ATGCTTTACT TGCAAGTTAT
ATTGAAGGAA GAGTTCTAAA CTTTATGAAA ACCCAAAACA TCGCTATTAT TACAACCCAC
TCTGCAAATA GTAATGTTAC TGATTCTGCC GCAGCAGGTA CTGCATTATT TACGGGATTC
AAAACCAATA ACGGAATGAT AGGCATGTTA CCAGATGGAA CAATTATTCC CACAATAGCA
GAAATTGCAG CAAAACAAGG GGTAAAAATT GGTATTATTT CTACTTCTAG AATTACACAT
GCAACTCCAG GTGCAGTATA TGGACACGTA AAATCAAGAA GTGATGAAAA CACGCTTGCA
GAACAACTAG TTAACAGTCC CATCACAGTT GCGTTTGGGG GAGGTTGGAG ACATTTTGTT
GCAACTGATG GAAAAAGAAA TGATGGAAAA GATTTAATAA AACTTGCAAA AGAAAAAGGA
TTTGACTATA TTACAACAAA AGAAGAATTG TTAAATTACA ACGGAAACAG AGTACTTGGT
CTTTTTAGTT CAAGTCACCT GCCAGCTGCT TCTGATAGGA TAAAAGAACC AATGTTAGCA
GAAATGACTA AAAAAGCTCT TGAAATACTA TCCAAAGACG GAAAACCATT CTTCTTAATG
ATTGAAGGTT CTCAAATTGA CTGGGAAGCT CACGGAAACG ATCCATATGG TGTCTGGAAA
GAAATAATAG AATTTGAACA AGCTTTTAAC GTGGCAATGG AATTTCTTAA AGAAAATCCA
GAAACATTAA TAATTGTAAC TGCAGATCAC GAAACTGGTG GATTAGGACT TTCCACAGGT
GGTTACTTCT TCGATGTTGA AATGCTAAAA AAATTTACCA AAAATACTGA TTTCATAGCA
AAGCACGCTA ACAAAGATAA AGAAAAAGTT AGAGAATTGG TAAAACAATA TTATGGGATT
GAATTTACAG ACGAAGACAT GGAATATTTT GATCTCATTC TCAAGGAACA AACTGGTTCT
TATTACGCAT TTTCAAATGC AATTGGAAGA GTGGTAAGTA GAAAAGCACA TATTGGATGG
ACAACCTTTG ACCATACTGC TGCACCAGTT GCTTTGTATG CATTTGGGAA AGGTGCAGAA
AACTTTAATG GTTTCTACGA CAACACTGAA ATTCCAAGGA TTATTGGAAG AATAGCTGGA
TATGAGATTA CATTCCCTAT TTACGAACTT CCAATTTCAG GAGGACATTA A
|
|---|
| Protein sequence | MKKGLLGLFL LVSLVSFAVT NVIYMVGDGM GINHALLASY IEGRVLNFMK TQNIAIITTH
SANSNVTDSA AAGTALFTGF KTNNGMIGML PDGTIIPTIA EIAAKQGVKI GIISTSRITH
ATPGAVYGHV KSRSDENTLA EQLVNSPITV AFGGGWRHFV ATDGKRNDGK DLIKLAKEKG
FDYITTKEEL LNYNGNRVLG LFSSSHLPAA SDRIKEPMLA EMTKKALEIL SKDGKPFFLM
IEGSQIDWEA HGNDPYGVWK EIIEFEQAFN VAMEFLKENP ETLIIVTADH ETGGLGLSTG
GYFFDVEMLK KFTKNTDFIA KHANKDKEKV RELVKQYYGI EFTDEDMEYF DLILKEQTGS
YYAFSNAIGR VVSRKAHIGW TTFDHTAAPV ALYAFGKGAE NFNGFYDNTE IPRIIGRIAG
YEITFPIYEL PISGGH
|
|---|
| |