Gene Tmel_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1125 
Symbol 
ID5297606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1150999 
End bp1151412 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content37% 
IMG OID640769403 
Productflagellar basal-body rod protein FlgC 
Protein accessionYP_001306365 
Protein GI150021011 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAGT TTAACATAAT GACTATTGCT GCAACGGGAA TGTCAGCACA AAGATTGAGA 
ATAGATGTAA TAACCAACAA CCTTGCAAAT TCTGAAACTA CACGTACAGA AAAGGGGGAG
CCATATAGAA GAAAAGTTCC TGTATTTCAA GAGCTTTTAA GAAATGTTAG AGGAAGATTG
GAAAATGGAG GAGTTGTGGT AAAAGAAATT TATGAAGATC AATCACCATT TAGAGTTGTG
TATGATCCTA CACATCCCGA TGCAGATGAA AATGGATATG TTAAGTTGCC AAATGTTAAC
GTTGTTAGGG AAATGGTGGA TATGATAAAT GCCCAACGTG CTTATGAGGC AAATGTTACA
GCATTTAATA CAACCAAGGC AATGATTAAC AGTGCTCTTC AGATTGGGAG GTGA
 
Protein sequence
MNEFNIMTIA ATGMSAQRLR IDVITNNLAN SETTRTEKGE PYRRKVPVFQ ELLRNVRGRL 
ENGGVVVKEI YEDQSPFRVV YDPTHPDADE NGYVKLPNVN VVREMVDMIN AQRAYEANVT
AFNTTKAMIN SALQIGR