| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1085 |
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| Symbol | |
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| ID | 5296617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1107598 |
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| End bp | 1109823 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 640769368 |
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| Product | DNA repair ATPase-like protein |
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| Protein accession | YP_001306330 |
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| Protein GI | 150020976 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0841172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA AAACGGTTAA AATTAATGGC ATAAGAGGTT TTCAGTATCA TGAAGCTCCT
CATGTTATTA GTTTAGATTG TAACCATTTC TTTTTGTTTG GAGAAAATGG GACTGGAAAA
TTTAGTTTTT TTGATGCCCT TGAATGGGGA TTAACTGGTG ATGTGAATGA AACAAGAGTA
AGAAAAGTGG GCAGCAAACA AGAATACTTG CGAAATAAAT TTTGCTTGCC TGGTGATGAA
CCTTACGTTG AAGTTAAATA TAAAAACAAT AGTAAAGAAG CAACTTGCAA GAGAATTTTG
GGAAGACAGA ATGATTGTGA AATAATTGAA GGGATTGAAA ACAATTTTAT TGATTCTAAA
CGAATAGAAG AATTTGTTAT TGACACAAAA CAATCATTGT GGAATAGATT TGCAAGGTTA
CTTGGATTTG ATAGTTTGAT AAAATTTGAA GAACAATTGA AACGGCTTAG AAATAAAGCA
AAAAATGAAT ATGAAAGTAT TAAAGAAAAG TTAAATGAAA AAAGAAAACA AATAAGAGAT
ATAGAAGAAG AAATTAAAAA TTTAGAATTA AGATTAAAAA AAGAGTTAGG GGAAAATTGG
AAAAGCCAGT TGGTGGATAA AGATAAACAA GGTTTATTGG AAACGCTAAA CAAGCTGAGG
GAAAAAGAAG AGGCTTTAAA AAATTTTGAA AAAACATTTA TTGAAAAAAA CAACCTAAAA
ACTCAGTTGA ATAATATTGA AAGTACAAAA GAAATGTTAA AAATTTCAAC AAATGAAATA
CAAATTTCAA GGGTAATTAA TGAAGCGCTC AATTATTTTT ATCAAAAAGA AGATATTAAT
AAGTGTCCAG TTTGTGGCCA GCCAATTGTT TATAAACAAG TACTAAAACG GTTAGAGACT
TTAAAAAAAG ATTTAGATAA AATAATTTCT TTAGATAATC AAAAAGAAAT TTTGAATAAA
AAGTTATCAG ATTTAGATTT AAAAGAAAAT GAATTAAAGA AAAAACTTCA AAAATACTAT
AAGGACATGA GCATATTTGA AAATTCAGAA AAATCGAATT TTATAAAGTA TGAAATAGGG
CCAACATCAA TAGAAGTTAG GAAGTTAGAA AAACAAATAT TCTTATTGGA AGAAAAAGGA
AGGTACATGA AAAGCATCGA TGATTTAGAA AAACAGGAAG AAGATTTAAA GCAATTAAAA
AATCAACACT ATCTGAAAAA GAAAATATAT GAAGATATAG ATAAATTTTA TACTTTATAT
TTAACAAAAT ATGGGAAGAC TATTCAAGAG GAATTAGAAA GAATAAGCAA AAGTGAAGTT
ACAAATGTAT ACAATGAAAT TACCCAGGCG AAAAATCAAT TTATTGAATA CATTGAAATT
AAGCCAAACA TAGAAAATCA TGAAATAACT TTTAAACTAA AGATTAGGGG TAAAGAAGAA
TTAGTCGATG CAATAACTTT TTTAAGCACA GGGCATTTAA GATGCTTAGG TTTTGCACTT
TTGATTGCAA GAGTTAAATT AAATTCAAGT AATGTAAATT TTATAGCAAT TGATGACCCA
ATTTATTCAG TAGACCATGA AAGAAGATAT TTTTTAATAA AGTATTTAAG AAAGTTAGCA
AATGAAGGCT ATCAACTTAT TATTACAACT TCTGATAGAA CTTTTTTTGA TATTATTAGG
CATCAATTTA ATGGAAACTC TTTTAATGCA TACAAAGCTT TTTTGGATGA TTACACTGGT
TTGGGAACTC AAGAGGCAAT TTTGGGTTCA GTAAAAATAA AAGGTTGGCC AAATAATTAT
ATTGAAAAAG CTGAAGAGCA TTTGGAAAAT AAGGATTTGA GAGCTGCAGC GTTATATTCT
AGGTTAGCTT TAGAAACTGT ATTTAGTATG GCAGCGAAAA AAATTAAGCT TGAAGTACCT
TATGATGAAG TTGAAAAGAT AGGAATAAAA GGTTTTAAAG ACGCAGGTTT AAAGAAAAAA
TTAGAAAAAG TATATTGTGA CAAATTAAAG GAAATTGACC GTCAATTTCA AAGATTAAGT
GACAATAGAT ATTTTGGGCA TTTGTTGAAT AGTTTTCCAC TTAGTCAGGA AGTTCATTTT
CCACACGATT CAAGAATAAG TTATGGTTAT GATGAAATAA GAGATTTAAT AGATATTTTG
AAAGATTTTA CGGACTTTCT TTTAAATTTG ATTAATGGAA ATAAAAGAAG TAGAACAAAC
TGTTAA
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| Protein sequence | MKIKTVKING IRGFQYHEAP HVISLDCNHF FLFGENGTGK FSFFDALEWG LTGDVNETRV
RKVGSKQEYL RNKFCLPGDE PYVEVKYKNN SKEATCKRIL GRQNDCEIIE GIENNFIDSK
RIEEFVIDTK QSLWNRFARL LGFDSLIKFE EQLKRLRNKA KNEYESIKEK LNEKRKQIRD
IEEEIKNLEL RLKKELGENW KSQLVDKDKQ GLLETLNKLR EKEEALKNFE KTFIEKNNLK
TQLNNIESTK EMLKISTNEI QISRVINEAL NYFYQKEDIN KCPVCGQPIV YKQVLKRLET
LKKDLDKIIS LDNQKEILNK KLSDLDLKEN ELKKKLQKYY KDMSIFENSE KSNFIKYEIG
PTSIEVRKLE KQIFLLEEKG RYMKSIDDLE KQEEDLKQLK NQHYLKKKIY EDIDKFYTLY
LTKYGKTIQE ELERISKSEV TNVYNEITQA KNQFIEYIEI KPNIENHEIT FKLKIRGKEE
LVDAITFLST GHLRCLGFAL LIARVKLNSS NVNFIAIDDP IYSVDHERRY FLIKYLRKLA
NEGYQLIITT SDRTFFDIIR HQFNGNSFNA YKAFLDDYTG LGTQEAILGS VKIKGWPNNY
IEKAEEHLEN KDLRAAALYS RLALETVFSM AAKKIKLEVP YDEVEKIGIK GFKDAGLKKK
LEKVYCDKLK EIDRQFQRLS DNRYFGHLLN SFPLSQEVHF PHDSRISYGY DEIRDLIDIL
KDFTDFLLNL INGNKRSRTN C
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