| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1083 |
|---|
| Symbol | |
|---|
| ID | 5296654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | + |
|---|
| Start bp | 1106437 |
|---|
| End bp | 1107381 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640769366 |
|---|
| Product | metallophosphoesterase |
|---|
| Protein accession | YP_001306328 |
|---|
| Protein GI | 150020974 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0420] DNA repair exonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0304691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAA TTATTATTTT AAGCGATTTA CATATCGGCG ATATGTCTGA TGCCGATGAT
TTTTATACCT CAGGAAATTT TGAAAAGTTT ATATCATTTC TTGAATATAT AAAAGATGAT
GAAGAAGTTG AAAAAATTGT TGTTGCAGGA GATTTTTTTG AGCTATGGCA ATGTAAAGTG
GAAAAGATTT TACAAATGTA TGTTGATTTA TGGAAAATTT TTCTTAAATT AAAAGAAACA
AAAAAAGAGA TAATATATAT ACCAGGAAAC CATGACTCCC TTCCTTTTGC AAAGCTTGTC
TATAAGGCAA CACCATTTCC TTTTGGCCCT ATACAGTTAA CAGATAAATA CGATGTTGAT
GAAGAAAAGA AGTTGATATT CCCATATTTT TCTGTAAATA ACCTTTGGAT TGAACATGGG
CATAGATTTG ATAAATATAA CAGAGATGTT TCAACACTTG CAGGTGGCTT TCAAGGTGTA
CTTGGAAGAT TTATAGGTAA GGCAATAGGA GTTATTGAAA GGATGGGGGC AAAGGATATA
GATGAACAAC TTGAAAGTTT AATGGATGTA ATAAAAGGTG CATGGAAAAA ATTAAAAGAT
AAGTTTTCAT CACCGTTTTA CAAAATAGCT GGAAATCTTC AGTCATATGT AACACCTGCA
AGTAAAGATT ATAGAGGAAA CTTTAAAGAA TACGATGAAG AAGGTTCAAT ATTTTTGGGG
GAAAAGTTAA TTGATAAAGG ATATGAAAAG GTATTTGTTG TATTAGGACA TACACATAAA
CCGAAAGTAG TTCAAATTGA CGAAAAAATC ATTTATGCAA ATTCCGGAAG TTGGGTTGGA
AAAGAGCCAA CTTTTTGTGT GTTTGATAGT AAAGAGCAAA GTGTGTCACT TTGTAAGTGG
GATGATGGCA AAGCAATACT ACTTGGTAAA AAGACGTTTA ATTAA
|
|---|
| Protein sequence | MSKIIILSDL HIGDMSDADD FYTSGNFEKF ISFLEYIKDD EEVEKIVVAG DFFELWQCKV
EKILQMYVDL WKIFLKLKET KKEIIYIPGN HDSLPFAKLV YKATPFPFGP IQLTDKYDVD
EEKKLIFPYF SVNNLWIEHG HRFDKYNRDV STLAGGFQGV LGRFIGKAIG VIERMGAKDI
DEQLESLMDV IKGAWKKLKD KFSSPFYKIA GNLQSYVTPA SKDYRGNFKE YDEEGSIFLG
EKLIDKGYEK VFVVLGHTHK PKVVQIDEKI IYANSGSWVG KEPTFCVFDS KEQSVSLCKW
DDGKAILLGK KTFN
|
|---|
| |