Gene Tmel_1059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1059 
Symbol 
ID5296665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1087090 
End bp1087425 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content27% 
IMG OID640769342 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001306304 
Protein GI150020950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0199058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCATAT ACGAAAAATA CAAAGAAGAT GTAAAACAAA TAACGGGGAA ATATTATAAA 
AAATACAAAA GGAAGATATG TTCTTACGAA GATTTGTATC AGACCGTATG GTATATATTA
CTTGCAGGCC TTAAAGTTTT TGACGGAAGA GGAGATGAAA GAAAATTTCT TTTGTTATTT
ATCAAAAACA AATTGATTTC AATATTAAAT TACAATAGAA AACCTCCGTA TTGTATAAAT
TATCCATTTA CTCCTTTAAA TATTGAATAT ATTTCTGCAG ACAACGATAA AAACAAATAT
TTTATGGAAA TCCACGGAGA TTTTAGTCGA AAATAA
 
Protein sequence
MGIYEKYKED VKQITGKYYK KYKRKICSYE DLYQTVWYIL LAGLKVFDGR GDERKFLLLF 
IKNKLISILN YNRKPPYCIN YPFTPLNIEY ISADNDKNKY FMEIHGDFSR K