Gene Tmel_1058 details

Gene Information

• Locus tag: Tmel_1058
• ID: 5296564
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: -
• Start bp: 1086255
• End bp: 1086977
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 640769341
• Product: hypothetical protein
• Protein accession: YP_001306303
• Protein GI: 150020949

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00171163
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAC TTTTGAAAGG ATGCGGTTTT TTTGTATTAA TAGTGCTTGT GGCATTTATA 
GGATTAATAG TGCTTGTAAA CATTAAATCT GGAAATGAAG AAGAAACTAC AACTACATAC 
AACCAACAAA TTACACAAGA AAGTACAGAA ACAGAAGATG AAAACTGGGA AAGTGAATTT 
TTAAAAAGCT ACGAATCTAC ACAAACAGTG CAGGAAGAAG AAGTAGAAAA AGTTTCTCAA 
CCAAAAATAG ACCTATATAA AATCCATAAT TTAAGAGAAT ATGTAGAAGA GCTATCACAA 
AGGTATGATT TAGAAAAAAT GAAAGAATAT CTATTTAGTC ACAAAAACAT AGTAAAAATT 
CTTTCAGAAG TTTCACCAAA CTCCGACATG GAAATATACA CAGAACAACT TGAAGAAATA 
AATCTTTTAC TTTCAAAATG GAAATCAATT GGTCTTCTTG GAATGAAAAT AGACCCAAAA 
AACAAAAACG TAAGAAAGCT AAACGAATAT CTAAACCAGA TGGTAAAAAT AAAAGATGAA 
TTAGTATTTA CATTAAGGAA TTATCTTAAC AATATAAACT CAAAAATAAA AAGTAAGATA 
TACCAAAGTA AAACTAAAAA GTTACTTGAT AAATACAAAG ATATTTATAA TAAATTCAAA 
GATAGATACA AATACACATT AAAGCAAGAA AACGAAGAAG ACCTTCTTGG ATTACTAAAA 
TAG 

 

Protein sequence

MKKLLKGCGF FVLIVLVAFI GLIVLVNIKS GNEEETTTTY NQQITQESTE TEDENWESEF 
LKSYESTQTV QEEEVEKVSQ PKIDLYKIHN LREYVEELSQ RYDLEKMKEY LFSHKNIVKI 
LSEVSPNSDM EIYTEQLEEI NLLLSKWKSI GLLGMKIDPK NKNVRKLNEY LNQMVKIKDE 
LVFTLRNYLN NINSKIKSKI YQSKTKKLLD KYKDIYNKFK DRYKYTLKQE NEEDLLGLLK