Gene Tmel_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1056 
Symbol 
ID5297565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1083916 
End bp1085466 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content33% 
IMG OID640769339 
Producthypothetical protein 
Protein accessionYP_001306301 
Protein GI150020947 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000468377 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGC TGCCGATAGG GGTACAGGAT TATAGAGAAA TAGTAGAAGA AAATTATGTT 
TATGTGGATA AAACAAAATA TTTGTATGAT TTAATGACAA GTGGGAAGTT TTACTTTTTA
TCACGACCAA GGAGGTTTGG GAAGAGTTTA ACGATATCGA CGTTGTATTA CATATTCAAA
GGGGAGAAAG AACTTTTCAG AGGAACATAC ATATACGACA AGTGGGATTT TAAAGAGTAT
CCCATTATTA AACTTGATAT GTCAGATAAT ATGTTAACGA CATACGAGGA TTTTGTAGAA
TCACTAAGTG AAAAAATTGA AAAGTTATAT AAAAATGAAG GGATAGCGAA TATAAATAAC
AATTTACCAA CGCGATTTGG TAATCTTATA GAAGAATTAA ACGCGAAATA CAGAGAAAGA
GTAGTGATAT TAATAGACGA ATATGAAGCA CCGATATTAG AACATATAAA TAACAAAAAA
GAAGCGGAAA AGATAAGAAG TTTTTTAAGA GAGTTTTATA AAAAGATAAA GACAAAAGAT
GAATACATAA AATTTGTTTT TATGACAGGG ATAACGAAGT TTACAAAGAC AGGGGTATTT
TCGGCATTAA ACAATTTGAA TGACATATCG TTGAACAAGA AATATTCACA GATGCTAGGG
TACACACAAG AGGAGCTAGA GTATTATTTC AAAGAACACA TAGAAGAGAC GGCAAGAGAG
ATAGGGATGG GGAAAGAAGA GTTAATAGAG AACCTGAAAG AATACTACAA TGGATTTTCA
TTTGATGGGA GGAGGAGTGT ATACAATCCA TTTTCGATAT TGAGATTTTT TGAAGAGAGA
GAATTTAAGA ACTATTGGTT TGAAAGTGGG TCACCATCGT TTTTGTACGA ATACATAAAG
GGGAGGAAAG TGACATATGA AGAGCTAGTG AAATATCCGG TAAGTGCAAT GGATTTTACG
ACGAGGGAGA TAGAAGATGC GAATGCGAAC ATATTCTTTG CCCAGGCGGG ATATTTGACA
TTTAAAGATG TAAGAAGGTA TGGATTTGAA GAAGAATACA TATTAGACTA TCCGAACATA
GAAGTGAGGA ACAGCTTTTC AAAGTTAATA TTAGAGGCAA ATTATGGAGT AGAAAAAGAA
AAGATAAAAG AGGTAAATAG AGAGATAATA AAGTCGTTAG AAAAAAATGA CATAAGAAGA
ATGATAGAAG AGATAAAGAG GATAATAAGC AGTATACCAT ACAATTTACA CAGGGGAGAA
GAGAGATATT ATCATTCATT GATATACACG ATAATAGCGT CAGCGGGAGT GAATGTGACA
GCAGAGGAAT TAACGAGTAT AGGTAGGAGT GACATAGTGA TAGAAGAAAG GGGAAAGGTA
TACATATTTG AGATAAAGAT AGACAAAGGA GCAAGGGAAG GGATAAGACA GATAAAAGAG
AAGAGGTATT ATGAGAAATA CGTAGGGAAA GAGATATATC TGATAGGGAT AAAGATAAGT
TCGAAAGAGA GGAATATAGA AGAGTATGTG ATTGAGAAAG TAGGAGGATA G
 
Protein sequence
MKKLPIGVQD YREIVEENYV YVDKTKYLYD LMTSGKFYFL SRPRRFGKSL TISTLYYIFK 
GEKELFRGTY IYDKWDFKEY PIIKLDMSDN MLTTYEDFVE SLSEKIEKLY KNEGIANINN
NLPTRFGNLI EELNAKYRER VVILIDEYEA PILEHINNKK EAEKIRSFLR EFYKKIKTKD
EYIKFVFMTG ITKFTKTGVF SALNNLNDIS LNKKYSQMLG YTQEELEYYF KEHIEETARE
IGMGKEELIE NLKEYYNGFS FDGRRSVYNP FSILRFFEER EFKNYWFESG SPSFLYEYIK
GRKVTYEELV KYPVSAMDFT TREIEDANAN IFFAQAGYLT FKDVRRYGFE EEYILDYPNI
EVRNSFSKLI LEANYGVEKE KIKEVNREII KSLEKNDIRR MIEEIKRIIS SIPYNLHRGE
ERYYHSLIYT IIASAGVNVT AEELTSIGRS DIVIEERGKV YIFEIKIDKG AREGIRQIKE
KRYYEKYVGK EIYLIGIKIS SKERNIEEYV IEKVGG