| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1055 |
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| Symbol | |
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| ID | 5297141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1082086 |
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| End bp | 1083171 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640769338 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_001306300 |
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| Protein GI | 150020946 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.455716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATTA TGCCAAATTT GCGTTTTGGA AATTTAGTTG CCAGGTTACC TATTATTCAA
GGTGGAATGA GTGTTGGAAT ATCACTTTCA AATCTTTCAA GTGCTGTTGC AAATGAAGGT
GGAATTGGAG TTATTGGTGC AGCTGGAATA GGAATGTTAG AAAAAGATTT TGAAACAAAT
TTCAGAAAGG CAAATATTAG AGCTTTGAGA AAGGAGATAA GAAAAGCTAG AAGTAAAACT
GATGGGATTA TAGGTGTAAA CATAATGGTT GCGCTTTCAG ATTTTACAGA ACTTTTTGAA
ACAGCAATTG AAGAAAAAAT AGATATAATA TTCATGGGAG CAGGTCTTCC TCTTGAAATC
CCTATCCAAA AGTTAAAGAA ATCATCCACA AAAATAGTTC CAATAGTTTC ATCGGAAAGA
GCTGCAAAGA TAATATTGAA ATACTACATA AAACATTACG GCATACTCCC AGATGGATTT
GTTGTTGAAG GACCAAAAGC GGGTGGACAT TTGGGATTTA AAAAAGAACA GATCTTTGAT
CAAGAATATG CTCTTGAAAA AATTATTTTA AAAGTTATAT CTGTGGTGAG AGAATATGAA
GAAAAATACA AGAAAAAAAT TCCAGTGATA GCGGCAGGAG GAATCTTTTC CGGAAAAGAT
ATTTATAAAT TTTTAAAGAT AGGGGCAGAT GGTGTTCAAA TGGCTACTAG ATTTGTGGCA
ACTGAAGAGT GCGATGCATC TGAAAAATTC AAAGAAATGT ATTTGAAATG CAAAAAAGAA
GATATCGTAA TCATTGACAG TCCTGTAGGA CTCCCGGGAC GCGCAATAAA AAACACTTTT
CTCGATAAAG TAAAAGCCGG TATTACAAGA CCCATAAAAT GTCCATGGAA ATGTTTAAAA
ACATGCGATT TTAGAAAAGC ACCATATTGC ATTGCAAAAG CTCTAACAAA AGCAAAGTTA
GGATTTTTAA AGGAAGGATT TGCATTTGCA GGAGAAAACG CTTTTAAAAT AAAAGAGATT
ATATCTGTAA AAAAACTAAT GGAAGAATTA AAAAGAGAAT TTAAAAATGC TGCTTTAGAA
ATGTAG
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| Protein sequence | MSIMPNLRFG NLVARLPIIQ GGMSVGISLS NLSSAVANEG GIGVIGAAGI GMLEKDFETN
FRKANIRALR KEIRKARSKT DGIIGVNIMV ALSDFTELFE TAIEEKIDII FMGAGLPLEI
PIQKLKKSST KIVPIVSSER AAKIILKYYI KHYGILPDGF VVEGPKAGGH LGFKKEQIFD
QEYALEKIIL KVISVVREYE EKYKKKIPVI AAGGIFSGKD IYKFLKIGAD GVQMATRFVA
TEECDASEKF KEMYLKCKKE DIVIIDSPVG LPGRAIKNTF LDKVKAGITR PIKCPWKCLK
TCDFRKAPYC IAKALTKAKL GFLKEGFAFA GENAFKIKEI ISVKKLMEEL KREFKNAALE
M
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