| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1053 |
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| Symbol | |
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| ID | 5297810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 1080621 |
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| End bp | 1081286 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640769337 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001306299 |
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| Protein GI | 150020945 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02254] HAD superfamily (subfamily IA) hydrolase, TIGR02254 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.594873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATACT TTGATCTTGA TAATACAATT TTAAACTTTG ATAAGTCAGA AGAATTTGCG
TTGAAAAAGG TTTTTGAGTT TATAAATATC CCATACAAAG AAGATTATTT GAATATTTAC
AGACCAATAA ATGAAAAATG GTGGAGACTT TTTTCCGAGG AAAAGTACAA AAAAGAAGTT
ATAGTGGTTG AGAGGTTTAG AGAGTTTTTT CAAAATGTGG GGATTGTTTG GAATGATTTG
GAAAAGATTG CGAGAGTTTA TTTAGAGGGG CTTTCAAATT CTGCGTTTTT TATTGATGGT
GCAGAAAAGT TTTTATCAGA TATGAAGTCT AAAGGCTTTA GAATGGCGAT ATTAACAAAT
GGAGTAGAGT ATGTACAACA AAAAAGATTT AAGGTGGCAA AGTTAGATAG ATTTTTTGAT
TTTATTTTAA CTTCTGAAAG GGTGGGAAAA CCAAAACCTA ATCCAGATAT TTTCTTTTAT
GCGAAAAAAT TATCAAAAGT ACCGTTAAAA GAATCTGTGT ATATAGGCGA TAACTTTGAA
ACAGACTTTG AAGGTGCAAG GAATGCAAAT CTTGATTTCA TTCTGTTTGA TTTTAGGGAT
AGATATAAAG ATGTGCAGTG TGATAAGGTA AAGGATTATG TGGGTTTATA TATGAGATTG
TTATAA
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| Protein sequence | MLYFDLDNTI LNFDKSEEFA LKKVFEFINI PYKEDYLNIY RPINEKWWRL FSEEKYKKEV
IVVERFREFF QNVGIVWNDL EKIARVYLEG LSNSAFFIDG AEKFLSDMKS KGFRMAILTN
GVEYVQQKRF KVAKLDRFFD FILTSERVGK PKPNPDIFFY AKKLSKVPLK ESVYIGDNFE
TDFEGARNAN LDFILFDFRD RYKDVQCDKV KDYVGLYMRL L
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