Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_1046 |
Symbol | |
ID | 5297737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | + |
Start bp | 1074558 |
End bp | 1075472 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640769330 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_001306292 |
Protein GI | 150020938 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGGAT TTTTGAATTT GTATAAGCCA AAGGGTGTAA CATCTCACGA TGTGGTTGAT GAAGTAAGAA GAAAACTAAA TATAAGAAGA GTTGGGCATG CTGGAACACT TGACCCCTTT GCAGAAGGGG TTTTGGTTGT AGGTGTTGGA AGTACTACAA GACTTTTAGA ATATTTACAA GTTGAAAGAA AAAGATACTA TGTGAAAGCT TTGTTGGGGG TTATTACTGA AACATTTGAT ATTACTGGAG AAATAGTTGA AGAAAGGGAA TGTAATATCC CAGATGAAAG GATTATTGAT GTCGTAAAGT CTTTTGTGGG AAAGTACAAA CAAGTTCCCC CTGCTTACTC TGCAAAAAAA TACAAAGGAG AAAGACTTTA CAAGCTGGCA AGAGAGGGAA AGATTATTTC ACTTCCACCA GTTGATGTTG AGATTTATGG TATAGATAAA ATAATTGTAA AAAAGCCACA TTTTTCGTTT GAAGTAGAAG TGTCTAAGGG TACGTATATT AGAAGTTTGT GTATGGATAT AGGATATAAG CTTGGGTGTG GTGCAACGGC AAAAGAATTA AAGCGATTGT CTGTTGGTAC ATTCGATATA CGCGATGCTA TAAATCCATT TGAAGTGGGA AGGGAAAAAT TGCTTGAAAG TTTAATAGAT GTTCAAAAGG TTTTACCATT ACCAAAGGTT GAGATATATA AAGATTTTGT TGAGAATATA TATAACGGGA ATCAACCTAC CCTTGATTTT GTAAAGGAAA TGGTGGATTC TTTTTCAAAA GATGATGATG TAATGCTGAT TTGCAATGGT CAATTGGTTG CCATTGCAAA GGCGGAAAGA AATTCTAAAT TTTTAGAAAA GAATTTACCA AGAGGGCGGA TTTTTAAATT AAAAAAAGTA TTTAAAGAAA TATGA
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Protein sequence | MMGFLNLYKP KGVTSHDVVD EVRRKLNIRR VGHAGTLDPF AEGVLVVGVG STTRLLEYLQ VERKRYYVKA LLGVITETFD ITGEIVEERE CNIPDERIID VVKSFVGKYK QVPPAYSAKK YKGERLYKLA REGKIISLPP VDVEIYGIDK IIVKKPHFSF EVEVSKGTYI RSLCMDIGYK LGCGATAKEL KRLSVGTFDI RDAINPFEVG REKLLESLID VQKVLPLPKV EIYKDFVENI YNGNQPTLDF VKEMVDSFSK DDDVMLICNG QLVAIAKAER NSKFLEKNLP RGRIFKLKKV FKEI
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