Gene Tmel_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1046 
Symbol 
ID5297737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1074558 
End bp1075472 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content34% 
IMG OID640769330 
ProducttRNA pseudouridine synthase B 
Protein accessionYP_001306292 
Protein GI150020938 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0130] Pseudouridine synthase 
TIGRFAM ID[TIGR00431] tRNA pseudouridine 55 synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGGAT TTTTGAATTT GTATAAGCCA AAGGGTGTAA CATCTCACGA TGTGGTTGAT 
GAAGTAAGAA GAAAACTAAA TATAAGAAGA GTTGGGCATG CTGGAACACT TGACCCCTTT
GCAGAAGGGG TTTTGGTTGT AGGTGTTGGA AGTACTACAA GACTTTTAGA ATATTTACAA
GTTGAAAGAA AAAGATACTA TGTGAAAGCT TTGTTGGGGG TTATTACTGA AACATTTGAT
ATTACTGGAG AAATAGTTGA AGAAAGGGAA TGTAATATCC CAGATGAAAG GATTATTGAT
GTCGTAAAGT CTTTTGTGGG AAAGTACAAA CAAGTTCCCC CTGCTTACTC TGCAAAAAAA
TACAAAGGAG AAAGACTTTA CAAGCTGGCA AGAGAGGGAA AGATTATTTC ACTTCCACCA
GTTGATGTTG AGATTTATGG TATAGATAAA ATAATTGTAA AAAAGCCACA TTTTTCGTTT
GAAGTAGAAG TGTCTAAGGG TACGTATATT AGAAGTTTGT GTATGGATAT AGGATATAAG
CTTGGGTGTG GTGCAACGGC AAAAGAATTA AAGCGATTGT CTGTTGGTAC ATTCGATATA
CGCGATGCTA TAAATCCATT TGAAGTGGGA AGGGAAAAAT TGCTTGAAAG TTTAATAGAT
GTTCAAAAGG TTTTACCATT ACCAAAGGTT GAGATATATA AAGATTTTGT TGAGAATATA
TATAACGGGA ATCAACCTAC CCTTGATTTT GTAAAGGAAA TGGTGGATTC TTTTTCAAAA
GATGATGATG TAATGCTGAT TTGCAATGGT CAATTGGTTG CCATTGCAAA GGCGGAAAGA
AATTCTAAAT TTTTAGAAAA GAATTTACCA AGAGGGCGGA TTTTTAAATT AAAAAAAGTA
TTTAAAGAAA TATGA
 
Protein sequence
MMGFLNLYKP KGVTSHDVVD EVRRKLNIRR VGHAGTLDPF AEGVLVVGVG STTRLLEYLQ 
VERKRYYVKA LLGVITETFD ITGEIVEERE CNIPDERIID VVKSFVGKYK QVPPAYSAKK
YKGERLYKLA REGKIISLPP VDVEIYGIDK IIVKKPHFSF EVEVSKGTYI RSLCMDIGYK
LGCGATAKEL KRLSVGTFDI RDAINPFEVG REKLLESLID VQKVLPLPKV EIYKDFVENI
YNGNQPTLDF VKEMVDSFSK DDDVMLICNG QLVAIAKAER NSKFLEKNLP RGRIFKLKKV
FKEI