Gene Tmel_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1040 
Symbol 
ID5297253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1069834 
End bp1070109 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content41% 
IMG OID640769324 
Productstage V sporulation protein S 
Protein accessionYP_001306286 
Protein GI150020932 
COG category[S] Function unknown 
COG ID[COG2359] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00126315 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAC TTAAAGTTAG TTCAAAGTCA AACCCCAACA AGGTAGCAGG TGCTATTGTA 
GGTTCTCTCA ATAAAAATGA AAAGCTCGAG ATTCAAGCGA TTGGGGCGGG TGCTGTTAAC
CAAGCCTCCA AGGCTTTAGC AGTTGCAAGG AGGTTTTTAG CTGAAGAGGG GAAAGACTTG
TATGCCGTAC CTGGTTTCAT TGAAGTTGAA ATTGATGGTG AAACAAGGAC AGGTATAACC
TTTAGGGTTT ATCTTACAAA AAAGAAGGCG GAATAA
 
Protein sequence
METLKVSSKS NPNKVAGAIV GSLNKNEKLE IQAIGAGAVN QASKALAVAR RFLAEEGKDL 
YAVPGFIEVE IDGETRTGIT FRVYLTKKKA E