| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1024 |
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| Symbol | |
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| ID | 5296777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1051259 |
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| End bp | 1053349 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640769308 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001306270 |
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| Protein GI | 150020916 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.352033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAAGA AAAAGAAAGT AATAATTGTT GAATCTCCGG CAAAGGCAAA AACTATAGAA
AAGATATTGG GGAAAAATTT TAAAGTTATA TCATCCAAAG GACACGTTAG GGATCTTCCA
CCAAAAAAAT TTGGAGTGGA CCTTAAAACT TTTGAGCCCG AATTTGAGAT AATTCCCGGG
AAAGAAAAGG TAATTGAAAA AATAAAGAAA GAAACAGAGG GAAAAGAAGT ACTTATAGCT
TCAGATATGG ATAGAGAAGG AGAAGCTATT GCCTGGCATT TGTCAAATAT CTTAAATCTA
TCTGGAAAAA ACCGTATAAT TTTCACTGAA ATCACTCCAA ATACCATTAA AAAATCCGTA
GAAAATCCAA GAGAGATTGA TATAAAAAAG GTAAATGCTC AGCTTGCAAG AAGGATACTC
GACAGAATAG TTGGATACAA AATAAGTCCC CTTCTTTGGA AAATAATTAA AGGTGCAATG
AGTGCAGGAA GGGTTCAATC AGCGGCACTA AAAATCATAT GTGATAGAGA AAGAAAAAGA
TTCTTATTTA AACCAAAGGA ATTCTACAAA GTTTCTATAG AAATAAAAAA GGTGAAAGCA
AACCTTTGGG GAATTTCTGG AAAAAAGATA AAACAAGAAA ACATAACTGA AGAAATAGCA
AATGACATTA AAGAAACGGT AAAAGAAGTA ATACTTGAAA AAATTTCAGA AAAAGAAAGA
AAAAAATCTT CACCTTTACC ATACATAACC AGTACATTAC AACAAGACGC TGCAACAAAA
CTGGGGTTTC CCGTTTCAAA AACAATGCAA ATTGCACAGG CGTTGTACGA AGGTGTGGAT
ACAAAAGAAG GTCATATCGC CTTTATAACC TATATGAGGA CTGATTCAAC TCGCGTTTCA
GAAGAAGCAA AAGAAATGGC AAAAGCATTT ATAGAAAAAA AATTTGGAGA AAATTATCTT
GGTACAACCA AAAAAGGAAA GAAAAAAAAG AAAAACGTAC AAGATGCCCA TGAATGTATA
CGACCTGTAA ATGTTGAAAT AACACCTGAG ATTGCACAAG ATCTGCTCAA TAAAGATATG
TACAAATTAT ACAAAATCAT ATGGAAAAGG TTCGTTGCCT CACAAATGAA AGAGGCTACC
TACAAAGACA AAACCTATAT ATTCAAAAGT GGAAAATACG AATTTAGAAC AACAATTTCG
CATAGGATAT TTGATGGTTT TGAAATAATT TACCCTGAAA AAGAAACTAC AGAAAAAGCT
GTACAGCTTA ATGAAGGAGA AAAATACAAA GTTTCAAAAA TAAATGTAGA GAAAGACGCT
ACAAAACCAC CTTCAAGATT TACCGAAGCA ACACTTGTAA AAACACTAGA AGCAGAAGGA
ATCGGAAGAC CAAGCACTTA TGCGACCATA ATTTCTACTT TACTCCAAAG AAAATATGTT
GTAAAAGAAA AAAAAGAACT CGTTCCCACA CTCCTTGGTT TTGTGGTAGA AGACTTTTTA
ACAAAAAAAT TTCCAGAAAT AGTAGACAAA AAATTTACAG CACTAATGGA AGAGGAATTG
GACAAAATAG AAGAAGGAGA AAAAAAGTGG AAAGAAGTCT TAAATGAATT TTACTCTAAA
TTTTCAAAAG ACTTATTAAA TGCACAAAAG GAATTCTATA CAATAAACTA TGAAACAGAT
TTAAAATGCG AAGAATGTGA AAATACATAT AAATTAAAAA TAGGAAAATA TGGATTGTAC
TTAAACTGCG AATCTTGTGG GAAAAACAAA AGCATCGATA ACACATTAAA TGCAGTTATA
ATCAAAAACA ATGCATACAT ACAAAAAGCT ATTGAAAAAA ATATAAAAGA AACAGTTTCT
GAAAATTCAT GTCCAAAATG TGGCGGACAT TTAACAAGAA AAAAAGGAAA ATTTGGATAT
TACTTTAAAT GTGACAATTG TGATTTTACA GTTTCCGGAT ATAAAATTGC GGCGGGGAGA
TGCCCCAAAT GTAGTTCTGT AGTTGTTATG AAAAGAAGTA AAAACAACAA AATATATTGG
GCATGTTCAA ATCCAGATTG TGATTATATG TCATGGAATG AACCAAAATG A
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| Protein sequence | MEKKKKVIIV ESPAKAKTIE KILGKNFKVI SSKGHVRDLP PKKFGVDLKT FEPEFEIIPG
KEKVIEKIKK ETEGKEVLIA SDMDREGEAI AWHLSNILNL SGKNRIIFTE ITPNTIKKSV
ENPREIDIKK VNAQLARRIL DRIVGYKISP LLWKIIKGAM SAGRVQSAAL KIICDRERKR
FLFKPKEFYK VSIEIKKVKA NLWGISGKKI KQENITEEIA NDIKETVKEV ILEKISEKER
KKSSPLPYIT STLQQDAATK LGFPVSKTMQ IAQALYEGVD TKEGHIAFIT YMRTDSTRVS
EEAKEMAKAF IEKKFGENYL GTTKKGKKKK KNVQDAHECI RPVNVEITPE IAQDLLNKDM
YKLYKIIWKR FVASQMKEAT YKDKTYIFKS GKYEFRTTIS HRIFDGFEII YPEKETTEKA
VQLNEGEKYK VSKINVEKDA TKPPSRFTEA TLVKTLEAEG IGRPSTYATI ISTLLQRKYV
VKEKKELVPT LLGFVVEDFL TKKFPEIVDK KFTALMEEEL DKIEEGEKKW KEVLNEFYSK
FSKDLLNAQK EFYTINYETD LKCEECENTY KLKIGKYGLY LNCESCGKNK SIDNTLNAVI
IKNNAYIQKA IEKNIKETVS ENSCPKCGGH LTRKKGKFGY YFKCDNCDFT VSGYKIAAGR
CPKCSSVVVM KRSKNNKIYW ACSNPDCDYM SWNEPK
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