| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1012 |
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| Symbol | |
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| ID | 5297796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1037015 |
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| End bp | 1038043 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640769296 |
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| Product | regulatory protein GntR, HTH |
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| Protein accession | YP_001306258 |
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| Protein GI | 150020904 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCTC TCTATCTAAG AATTGCAAAT TTTATCGAAA CCAAAATATT AAAAGGCGAC
TATTTACCAG GCGATAAAAT TCCTTCGGAA AATGTACTTG CCGAAGAATT TAACACAACC
AGAAGCACTG TAAGAAAAGC CTTATCAGAA CTTGAGAAAA AGGGAATAAT AACCCGTGTT
TTTGGAATTG GGACCTTTGT AACGGAAATC AACGTCATAT CTAAAAAGAA AATAGGTATC
ATTGTTCAGA ACACAAAAAT TGTATACGGA ATAATAAAGT TTTGTTCAAA AATAGGAAGT
AAATGTTTTG TAGTAGAAAG CATACCAAAT CTTGAAGCAG AAAAAAACGC TATAAAAGAA
TTACTTTCAA TGGGCGTAGA CGGTATAATA ATGGAGCCAA CAATAATTAC TATGGGAAAC
GAAATATTAA AATCTTTATT AAATTCAAAC TTTCCAATTG TTTTTGTAGA TAGAAATATT
GATATAGGAA TGTCAGTACC AACAGTTTTA AACGACAATT ACCACGGTGG AAAAATATTA
GGTGAACATA TGAGAAAATA TCATAAAACA AAAAAACCGC TATACGTTAC AAGCGAAGAT
TTGACAATTT CAAGCGTTCA AGAAAGATAT CAAGGTATCT CTTCAGGATT AAAAATAAAA
CCTGAAATTT TAAAAATTCC CACAATAGAC GGAGACTATT CCAAACTTGT AAAACTCTCA
AAGAATTTCG ATACAATCTT CTTCTGTAAC GATATGATGG CAGTTAGAGG AATTACCACA
TTACTTAAGG CAAACGTAAA AATACCCGAA GATGTAAAGA TTGTGGGATA TGATAACGAC
TACGTATCCA AAGTAATTGA ACCTCCACTT ACAACTATTA ACCAAGATTT ATCATTAATA
GGAGAAACAG CAGCTTCATT AATAGTTAGA CTTATAAAAA AGGAAAACAT AGAAATGATC
AATAGAATAA AAAGCAATAT TGTGGTTAGA AATTCATGTG GATGTGGAAA GGGTGAAAAA
CATGTATAG
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| Protein sequence | MIPLYLRIAN FIETKILKGD YLPGDKIPSE NVLAEEFNTT RSTVRKALSE LEKKGIITRV
FGIGTFVTEI NVISKKKIGI IVQNTKIVYG IIKFCSKIGS KCFVVESIPN LEAEKNAIKE
LLSMGVDGII MEPTIITMGN EILKSLLNSN FPIVFVDRNI DIGMSVPTVL NDNYHGGKIL
GEHMRKYHKT KKPLYVTSED LTISSVQERY QGISSGLKIK PEILKIPTID GDYSKLVKLS
KNFDTIFFCN DMMAVRGITT LLKANVKIPE DVKIVGYDND YVSKVIEPPL TTINQDLSLI
GETAASLIVR LIKKENIEMI NRIKSNIVVR NSCGCGKGEK HV
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