| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1011 |
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| Symbol | |
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| ID | 5296492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1034056 |
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| End bp | 1037022 |
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| Gene Length | 2967 bp |
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| Protein Length | 988 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640769295 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001306257 |
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| Protein GI | 150020903 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0892535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAGAA GCAAAGACAA GGAATTAAAT CATTTAAAGA GAATGTTATC GGAAATCTTT
CCATATTGCA TAATAAAAAG GACACCACTT GAAGGTTGGA AAGTAAATAA AAAACTGATA
TCACCTCCAT TTAAATGGAA TAAAAATTTA ATTATCTTTG AAAACGAGTT TTTACTTTCT
GAAAAAAATG TGTATTTCAG AGGATGGTTT GGAGGAGAAT CATTGGTGTA TATAGATGGT
GAAACAGTTG GAGAGATAAA TCCATATCAC CGTGAAATAG ACCTTTCTCA TTTTTCTGAT
GGAAAAAAAC ACAACATAAA AGTTGAAACA GTTCCAAGAG GATTATTTGG AACAAAAGAA
GAACCTATCT TTAATGAATC TTTCTTTATA AAATACGACA TAGAATTTAA ACGGGCATTA
AATTTTGTAT ACAACGTAAT TCAGGTAGCA GAAGAGACAA AAAATAATAC ACTCTCAAAA
AAACTCATGG ATTTAACTGA TGAATTTCTC TCCAGTATAC ACATTCCAAG AAATACAGAA
GAATATTTGG AAAACGCTTT GGACAACCCA GCAATAATAA ATGAAGTAAA AAGTGTATGG
AATCCCCCAA AATTAAAACA AAAAAACTCA AGGGACAACA AAGAAATTAA AGAGAAATTT
CTAACTGCAT TTAGCAAATA CAAAGCAAAA ATAAAAGAAA TAGATATTCC AAAATACGGG
AAAGTTTTTT TAGTAGGACA TGCACATATC GATTATGCCT GGCTTTGGCC TATTGATGAA
ACAAAAAGAA AAATAAACAG AACGTTTTCA AACGCAATTT CCCTTTCTCA AAAATACAAA
GAATTCATCT TTACACAATC CTCTGCAAAA ATGTACAAAG ACATCAAAGA AACAAATCCC
ATATTGTTTT CAAAAATAAA ACAAAAGGTG AAAGGTGGGC AATGGGAAAC AATTGGTGGA
ATGTGGGTAG AATCAGATTG TAATATTCCT TCGGCTGAAT CATTAATTAG GCAATTTTAC
TATGGGCAAA AGTTTTTTGA AAAAGAATTT GGAAAAAAAT CAAATGTTTG TTGGCTTCCA
GATGTCTTCG GTTTTTCATG GATTCTCCCT CAAATATTAA AAGAAGCAAA TATAGACTAC
TTTGTAACCA CAAAACTTTA CTGGAACGAA TCAAATGAAT TTCCATACGA CCTATGCAAA
TGGCGTGGTT TAGATGGAAG TGAAGTAATA TACTATAGCT TCAAAAATTT AGAAGAAGGA
TACAACGGAA AAATATCGGC AAAATCTGTA CTAAACACAT TTGAAAATTT TAGACAAAAA
GACCTTACAT CTAATATTCT ACTTTCATTT GGATATGGTG ATGGTGGAGG GGGTCCTACC
GAAGAAATGT GTGAAAACTA TTATGCGCTA AAAGAAATTC CCGGGATACC CGATATACAA
TATTCCCAAG TTGGAAATTT TGTAAAAAAA CTTCCAACCA AAAACCTCCC AACATGGGAT
GGTGAACTAT ACCTTGAATT ACACAGAGGA ACTCTTACTT CACAATCTAG GATAAAAATA
TTACATAAGA AATGTGAAGA CAAATTAAGA GAAGTAGAAA TACTAAATGT TTTACTAGAT
AAAGATTACC AAAAAGAAAT AGACAACCTC TGGGATACTG TATTGTACAA CGAATTCCAT
GACATTCTTC CAGGCTCTTC AATAAATGAG GTATACGAAA GAGCAGAAAA AGAATTATCA
TTTGTATTAA AAAAAGCAAA AGAGATCGAA GATAAAATAA CGGGAGAAAA AACAGATAGA
TATATTACCA TATTTAATCC TTCTTCATTT AAACAAAAGA TAAAATTCAC ATTAGACAAG
GCATTTACAC TAGAATTAAA TGGAAAATCT CTAAAAGTTC AAAAAACATT TGATGGTAAA
TTCATATATT ATTTAGATGA AACAATAGAT CCACTTGAAT TTTTGAAATT AAAAATAAAA
AATTCAAAGC CTATTTTTGA AGAAGGCAAA TTTAAAAACA ATCCTATAGA TTTTTCAATA
AATGAAGATG GCACAATAAA CTTATATTAT GAAGATAAAT ACGAAAAAAA TTTGAACACC
TTAATGCTTT ACAAAGACAT TCCATACTAT TGGGAAAACT GGGATATTGA CATAAACTAC
AAAAAATCTG GTATAAAGCT TGAAGCAGAA AACATACAAA CACTCGAAGA AGGGCCATTA
AGAAAAGTAA TACAAATAAC ATACAACATT GAAAATTCAA CTATTAGACA ATATTACATT
ATTTGGAAAG ATTCAAAAGT TGTGGAAATA AAAAATGAAA TAGATTGGCA TATGAGAAGG
AGTCTATTAA AAGCCTTATT TCCAACAGAT ATACTTAGTA GGATAGCAAC ATATGATTTA
GACATAGGAT ACATACAACG ACCCACTCAT AAAAATACAA ATTATGAAAA GGCCCGATTT
GAAGTTTTAG GACATAGATG GGTAAATCTT TCGCAATACG ATTTTGGAAT ATCCATACTC
AATAATGGAA AATATGGACA CCATGTTGAC AGAAACACAA TTGAATTGTC TTTATTAAAA
TCAGGAATAT ACCCTGACTT TTTTGCAGAC GAAGGAAAAC ACGAATTTTC ATACGCTATC
CTTCCAAGTA ACGACGTAAA AGAAACCATT CAAGCCGCAG ATATATTTAA CAAAAACATT
ATAGCATTTT ACAAGGATTT AGAATGTAAA AGAAAGATAG AAATCTCTCC AGATAATTTC
AAAATCCTAG CCTTAAAACA AACAAACAAC AATATAGTCT TACGAATAGC AGAAGTTGTA
GGAACAAGTG GCAAACTTAA ATTAAACATT CCATTTTCCA GAAAAATCTC ACTGACTAAT
ATTTTAGAAG AAGAAAAAAT CGAATTAAAA AGTAATGAAA TAACCTACTT CCCTTTCAAA
ATATATACCC TCCTAATAGA AAAATAG
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| Protein sequence | MYRSKDKELN HLKRMLSEIF PYCIIKRTPL EGWKVNKKLI SPPFKWNKNL IIFENEFLLS
EKNVYFRGWF GGESLVYIDG ETVGEINPYH REIDLSHFSD GKKHNIKVET VPRGLFGTKE
EPIFNESFFI KYDIEFKRAL NFVYNVIQVA EETKNNTLSK KLMDLTDEFL SSIHIPRNTE
EYLENALDNP AIINEVKSVW NPPKLKQKNS RDNKEIKEKF LTAFSKYKAK IKEIDIPKYG
KVFLVGHAHI DYAWLWPIDE TKRKINRTFS NAISLSQKYK EFIFTQSSAK MYKDIKETNP
ILFSKIKQKV KGGQWETIGG MWVESDCNIP SAESLIRQFY YGQKFFEKEF GKKSNVCWLP
DVFGFSWILP QILKEANIDY FVTTKLYWNE SNEFPYDLCK WRGLDGSEVI YYSFKNLEEG
YNGKISAKSV LNTFENFRQK DLTSNILLSF GYGDGGGGPT EEMCENYYAL KEIPGIPDIQ
YSQVGNFVKK LPTKNLPTWD GELYLELHRG TLTSQSRIKI LHKKCEDKLR EVEILNVLLD
KDYQKEIDNL WDTVLYNEFH DILPGSSINE VYERAEKELS FVLKKAKEIE DKITGEKTDR
YITIFNPSSF KQKIKFTLDK AFTLELNGKS LKVQKTFDGK FIYYLDETID PLEFLKLKIK
NSKPIFEEGK FKNNPIDFSI NEDGTINLYY EDKYEKNLNT LMLYKDIPYY WENWDIDINY
KKSGIKLEAE NIQTLEEGPL RKVIQITYNI ENSTIRQYYI IWKDSKVVEI KNEIDWHMRR
SLLKALFPTD ILSRIATYDL DIGYIQRPTH KNTNYEKARF EVLGHRWVNL SQYDFGISIL
NNGKYGHHVD RNTIELSLLK SGIYPDFFAD EGKHEFSYAI LPSNDVKETI QAADIFNKNI
IAFYKDLECK RKIEISPDNF KILALKQTNN NIVLRIAEVV GTSGKLKLNI PFSRKISLTN
ILEEEKIELK SNEITYFPFK IYTLLIEK
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