Gene Tmel_1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1009 
Symbol 
ID5297429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1031072 
End bp1032613 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content34% 
IMG OID640769293 
Productcarbohydrate kinase, FGGY 
Protein accessionYP_001306255 
Protein GI150020901 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.888443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATG CAATTAGTAT AGATTGCGGT ACACAAAGTC TTAGAACTCT GTTATTTGAT 
GAAAACGGGC AATTACACGA CATGGAAAAA ATAACATACA CACCATATTT TTCAAAAATG
CCAGGTTGGG CAGAACAACA TGTTGATGTA TATTGGAATG CGCTTTGCAA ATCTGTAAAA
AATTTAAAAG AAAGAAACAA AGAAAAATTC CGTAAAGTAT TAGGTGTAAG CATTACAACT
CAAAGAGATA CAGTGGTATT TTTAGACAAA GATGGCAATC CACTTAGGCC TGCTATTATT
TGGCTTGATC AGCGAAAGGC ACCGCCAAAA AATCCTTTAA ATTTCTTTGA AAACATAGCT
TTTTCCATAA TAAGAATGAA AGAAACAGCA CTAAGAATAT ATAGAAAAAG CAGACCAAAT
TGGGTAAGAG AAATGGAGCC AGAAATTTGG GGGAAAATTT CAAAAATCTT GCTTCTTTCT
AGTTATTTCT TATATAAACT AACGGGAAAA TTTATAGATT CAAAAGCTTC GCAAATCGGA
CATATTCCAT TTGACTACAA AAGACAAAGT TGGCCAAAAA GTGATAAACA TTGGAGATGG
AGACTTTTTG GCTTTAGACG GGATTTTTTA CCTGAACTAG TAGAACCGTG CACTGCTGTG
GGAAAAATAA CAAAAAAAGT TGCCAACGAA ACTGGTTTAC CAGAAGGGAT TGATATAATA
ACATCTGGTT CTGATAAGGG GTGTGAAACA CTAGGAACGG GATGTATAAA TACCGATTGT
GCAAGTTTAA GCTTCGGTAC AACAGCTACA ATACAGGTTA CTTCCCAAAA ATACTTTGAA
CCAATTTCAT TTATACCTCC ATATCCAGCA GTTGTGCCGA ATAGTTACAA TCCTGAAATA
GAAATATTTA GAGGGTATTG GCTTGTCAAA TGGTTCATAA AGGAATTTGG CGAAAAGGAA
ATAAAACTTG CGGAAAAGCT AAATGTCGCT CCTGAAATAG TATTAAACGG TTTTTTAGAT
AACATACCGC CTGGTTCACA CGGTCTTGTA CTCCACCCCA TGTGGACACC GGGACTTGAT
ATGCCAAACG CAAAAGGTGC AATTATTGGA TTTGGAGATG TTCATACAAA AGGACACGTA
TACAGAGCAA TAATAGAAGG AATTAATTAT GCACTACGTG ATGGTATGGA AAGGATTGAA
AAAAAGGGAA AGATAAAAAT AAAAAAGTTA ACAGTTTCAG GTGGCGGTGC CCAAAGCAAT
CGCATATGTC AAATCACGGC AAATATGTTT AACCTTCCTG TATACAAACC TTTAACCCAT
GAAACATCTG GTCTTGGTGC TGCAATCTGT GTTTTTGCAG CATATTCTGA TATTAAAACT
GTGGTAAAAA ATATGGTACA CTATTCAAAA GTTTTTTATC CGCAAAAAGA AGAAGTCGAA
ATATACGAAA AATTGTATAA AAAGGTATAC AAAAAAATAT ACTCCTCTTT AAAAAACATA
TACGAAGATA TCAAAAAGAT AACAAATTAT CCTGAAGATT AA
 
Protein sequence
MNYAISIDCG TQSLRTLLFD ENGQLHDMEK ITYTPYFSKM PGWAEQHVDV YWNALCKSVK 
NLKERNKEKF RKVLGVSITT QRDTVVFLDK DGNPLRPAII WLDQRKAPPK NPLNFFENIA
FSIIRMKETA LRIYRKSRPN WVREMEPEIW GKISKILLLS SYFLYKLTGK FIDSKASQIG
HIPFDYKRQS WPKSDKHWRW RLFGFRRDFL PELVEPCTAV GKITKKVANE TGLPEGIDII
TSGSDKGCET LGTGCINTDC ASLSFGTTAT IQVTSQKYFE PISFIPPYPA VVPNSYNPEI
EIFRGYWLVK WFIKEFGEKE IKLAEKLNVA PEIVLNGFLD NIPPGSHGLV LHPMWTPGLD
MPNAKGAIIG FGDVHTKGHV YRAIIEGINY ALRDGMERIE KKGKIKIKKL TVSGGGAQSN
RICQITANMF NLPVYKPLTH ETSGLGAAIC VFAAYSDIKT VVKNMVHYSK VFYPQKEEVE
IYEKLYKKVY KKIYSSLKNI YEDIKKITNY PED