Gene Tmel_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_1003 
Symbol 
ID5296496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp1025743 
End bp1026261 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content33% 
IMG OID640769287 
ProductAMMECR1 domain-containing protein 
Protein accessionYP_001306249 
Protein GI150020895 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.276986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGGAA AACACCCATA CGTCCAATGG GCAATTAATG TTATAGAAAA TTATGTTTTG 
CATTCAATAG TAATTGAACC TCATAATAAC CTTCCAAAAG AGTTATTTGA AAAACGTGCA
GGATGTTTTG TAACCCTTCA CACAAAAGCT GGGAAATTAA GAGGATGCAT AGGAACATTT
CAACCTACCC AAGAAAATCT TGCGCTAGAA ATACGAAATA ACGCCATAGC AGCCGCAATG
CAAGATCCAA GATTCCCACC CGTTTCAAAA GAAGAATTGG AAAACATTGT TGTTTCAGTT
GATATTTTAA GTGATATAGA AAAAGTAGAT TCAATTAACG AGCTGGATCC CAAAAAATTT
GGAATAATAG TACAAAAAGG TTTTAGAAGA GGATTACTGC TTCCTGATAT AGAAGGGGTT
GAAACAGTAG AAGAACAAAT TAAAATAGCA AAATTAAAAG CTGGAATCTT TGACAATAAC
TTTGAAATAT TCAAATTTAC CGTCCAAAGA TATCATTGA
 
Protein sequence
MIGKHPYVQW AINVIENYVL HSIVIEPHNN LPKELFEKRA GCFVTLHTKA GKLRGCIGTF 
QPTQENLALE IRNNAIAAAM QDPRFPPVSK EELENIVVSV DILSDIEKVD SINELDPKKF
GIIVQKGFRR GLLLPDIEGV ETVEEQIKIA KLKAGIFDNN FEIFKFTVQR YH